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BaseInfo

ncRNA ID novel_zma_miR14918
Species Zea mays
Class miRNA
Genome position Chr4:148882989-148883049 [-]
Reference genome RefGen_v4
Source SRR1583942
Length 24
Mature sequence(if miRNA) 38 - GAUGUGUGCCUAUCACAAGCGGUU - 61
Stem-loop(if miRNA) --    U UG C       A        AU
  GAUG G  C UAUCACA GCGGUUCC  U
  |||| |  | ||||||| ||||||||  A
  CUAU U  G GUAGUGU CGUCAAGG  G
CA    C GU U       C        CC
Stem-loop sequence GAUGUGUGCCUAUCACAAGCGGUUCCAUUAGCCGGAACUGCCUGUGAUGUGUGUCUAUCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001346990.1
ncRNA:24   UUGGCGAACACUAUCCGUGUGUAG   1
  ||||||*||||||||*||||||||
targets:1384   AACCGCCUGUGAUAGACACACAUC   1407

2.5 Zea mays WAT1-related protein (LOC100304260), transcript variant 2, mRNA NA coding protein psRNATarget
XM_008683066.2
ncRNA:24   UUGGCGAACACUAUCCGUGUGUAG   1
  ||||||*||||||||*||||||||
targets:1454   AACCGCCUGUGAUAGACACACAUC   1477

2.5 PREDICTED: Zea mays WAT1-related protein (LOC100304260), transcript variant X3, mRNA NA coding protein psRNATarget
BT068055.1
ncRNA:24   UUGGCGAACACUAUCCGUGUGUAG   1
  ||||||*||||||||*||||||||
targets:1519   AACCGCCUGUGAUAGACACACAUC   1542

2.5 Zea mays full-length cDNA clone ZM_BFb0031N10 mRNA, complete cds NA coding protein psRNATarget
BT086495.1
ncRNA:24   UUGGCGAACACUAUCCGUGUGUAG   1
  ||||||*||||||||*||||||||
targets:1593   AACCGCCUGUGAUAGACACACAUC   1616

2.5 Zea mays full-length cDNA clone ZM_BFc0172L11 mRNA, complete cds NA coding protein psRNATarget