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BaseInfo

ncRNA ID	novel_zma_miR14916
Species	Zea mays
Class	miRNA
Genome position	Chr4:172484960-172485074 [-]
Reference genome	RefGen_v4
Source	SRR1583942
Length	20
Mature sequence(if miRNA)	96 - UAAGUCGUUCUAGCUUUUCU - 115
Stem-loop(if miRNA)	--     C   CUA           C         C     C  ACCUAAAU     UU   UAAGU GUU   GCUUUUCUAGA ACAUGGUUU UAUUA GC        AUCUA  A   ||||| |||   ||||||||||| ||||||||| ||||| ||        |||||  U   GUUCA CAA   CGAAAAGAUCU UGUAUCGAA GUGAU CG        UAGAU  G AC     A   AAC           A         A     -  ---AUACU     CU
Stem-loop sequence	UAAGUCGUUCUAGCUUUUCUAGACACAUGGUUUCUAUUACGCACCUAAAUAUCUAUUAUGUCUAGAUUCAUAGCUAGUGAAAGCUAUGUAUCUAGAAAAGCCAAAACAACUUGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT035138.2	ncRNA:20   UCUUUUCGAUCUUGCUGAAU   1   |||=|||||||||||||||* targets:1402   AGAGAAGCUAGAACGACUUC   1421 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0041P14 mRNA, complete cds	NA	coding protein	psRNATarget
BT034081.1	ncRNA:20   UCUUUUCGAUCUUGCUGAAU   1   |||=|||||||||||||||* targets:1776   AGAGAAGCUAGAACGACUUC   1795 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0032K16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001137274.1	ncRNA:20   UCUUUUCGAUCUUGCUGAAU   1   |||=|||||||||||||||* targets:1776   AGAGAAGCUAGAACGACUUC   1795 Target Full Sequence	2.0	Zea mays 4-coumarate--CoA ligase-like 7 (LOC100191850), mRNA	NA	coding protein	psRNATarget
EU956613.1	ncRNA:20   UCUUUUCGAUCUUGCUGAAU   1   |||=|||||||||||||||* targets:1781   AGAGAAGCUAGAACGACUUC   1800 Target Full Sequence	2.0	Zea mays clone 1568159 4-coumarate--CoA ligase 2 mRNA, complete cds	NA	coding protein	psRNATarget
EU956764.1	ncRNA:20   UCUUUUCGAUCUUGCUGAAU   1   |||=|||||||||||||||* targets:1881   AGAGAAGCUAGAACGACUUC   1900 Target Full Sequence	2.0	Zea mays clone 1573096 mRNA sequence	NA	coding protein	psRNATarget
EZ074836.1	ncRNA:20   UCUUUUCGAUCUUGCUGAAU   1   ||=|||||||*||||||||| targets:25   AGGAAAGCUAAAACGACUUA   44 Target Full Sequence	2.5	TSA: Zea mays contig10473, mRNA sequence	NA	coding protein	psRNATarget
XM_008674394.2	ncRNA:20   UCUUUUCGAUCUUGCUGAAU   1   **|=|||||||||||||||* targets:1803   UCAGAAGCUAGAACGACUUC   1822 Target Full Sequence	3.0	PREDICTED: Zea mays 4-coumarate--CoA ligase-like 7 (LOC100191850), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546942.1	ncRNA:20   UCUUUUCGAUCUUGCUGAAU   1   |*|||||||*|||||||||| targets:220   AAAAAAGCUUGAACGACUUA   239 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109943549 (LOC109943549), mRNA	NA	coding protein	psRNATarget