Search result

BaseInfo

ncRNA ID novel_zma_miR14913
Species Zea mays
Class miRNA
Genome position Chr4:183713561-183713628 [-]
Reference genome RefGen_v4
Source SRR1583942
Length 24
Mature sequence(if miRNA) 1 - AAGGGGGUCGGUGCCAAGAUCUAU - 24
Stem-loop(if miRNA) --         UG          G  UA   CCG
  AGAUCUUGG  CCGAUCCUCU GA  GCG   G
  |||||||||  |||||||||| ||  |||
  UCUAGAACC  GGCUGGGGGA CU  CGU   A
UA         GU          A  GC   UCC
Stem-loop sequence AGAUCUUGGUGCCGAUCCUCUGGAUAGCGCCGGACCUUGCCGUCAAGGGGGUCGGUGCCAAGAUCUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545863.1
ncRNA:24   UAUCUAGAACCGUGGCUGGGGGAA   1
  ||||||||||||=||||||||||*
targets:142   AUAGAUCUUGGCGCCGACCCCCUG   165

2.5 PREDICTED: Zea mays serine/arginine repetitive matrix protein 1-like (LOC109943065), mRNA NA coding protein psRNATarget
XM_020547098.1
ncRNA:24   UAUCUAGAACCGUGGCUGGGGGAA   1
  ||||||||||||=||||||||||*
targets:142   AUAGAUCUUGGCGCCGACCCCCUG   165

2.5 PREDICTED: Zea mays vegetative cell wall protein gp1-like (LOC103637036), mRNA NA coding protein psRNATarget
XM_008672979.2
ncRNA:24   UAUCUAGAACCGUGGCUGGGGGAA   1
  ||=|||||||||=||||||||||*
targets:1   AUGGAUCUUGGCGCCGACCCCCUG   24

2.5 PREDICTED: Zea mays atherin-like (LOC103648529), mRNA NA coding protein psRNATarget
XM_020549155.1
ncRNA:24   UAUCUAGAACCGUGGCUGGGGGAA   1
  ||=|||||||||=||||||||||*
targets:20   AUGGAUCUUGGCGCCGACCCCCUG   43

2.5 PREDICTED: Zea mays extensin-like (LOC109944402), mRNA NA coding protein psRNATarget