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BaseInfo

ncRNA ID novel_zma_miR14910
Species Zea mays
Class miRNA
Genome position Chr3:93516248-93516310 [+]
Reference genome RefGen_v4
Source SRR2089706;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - AUUAUAGGGCAGUCUACUACGGUG - 24
Stem-loop(if miRNA) --           G   A  AC    UAAUAU
  AUUAUAGGGCA UCU CU  GGUG      A
  ||||||||||| ||| ||  ||||
  UGAUAUCCCGU GGA GA  UCAC      U
UU           G   -  GU    UGAGUU
Stem-loop sequence AUUAUAGGGCAGUCUACUACGGUGUAAUAUAUUUGAGUCACUUGAGAGGGUGCCCUAUAGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163409.1
ncRNA:24   GUGGCAUCAUCUGACGGGAUAUUA   1
  |||||||||=|=||||||||||||
targets:99   CACCGUAGUGGGCUGCCCUAUAAU   122

2.5 Sequence 1073 from Patent EP2559767 NA coding protein psRNATarget
LQ235078.1
ncRNA:24   GUGGCAUCAUCUGACGGGAUAUUA   1
  |||||||||=|=||||||||||||
targets:99   CACCGUAGUGGGCUGCCCUAUAAU   122

2.5 Sequence 1073 from Patent EP2985353 NA coding protein psRNATarget
HI402948.1
ncRNA:24   GUGGCAUCAUCUGACGGGAUAUUA   1
  |||||||||=|=||||||||||||
targets:99   CACCGUAGUGGGCUGCCCUAUAAU   122

2.5 Sequence 1073 from Patent EP2074227 NA coding protein psRNATarget
AY106673.1
ncRNA:24   GUGGCAUCAUCUGACGGGAUAUUA   1
  |||||||||=|=||||||||||||
targets:1443   CACCGUAGUGGGCUGCCCUAUAAU   1466

2.5 Zea mays PCO111223 mRNA sequence NA coding protein psRNATarget
BT061162.2
ncRNA:24   GUGGCAUCAUCUGACGGGAUAUUA   1
  |||||||||=|=||||||||||||
targets:1611   CACCGUAGUGGGCUGCCCUAUAAU   1634

2.5 Zea mays full-length cDNA clone ZM_BFb0117D02 mRNA, complete cds NA coding protein psRNATarget
EU952101.1
ncRNA:24   GUGGCAUCAUCUGACGGGAUAUUA   1
  |||||||||=|=||||||||||||
targets:169   CACCGUAGUGGGCUGCCCUAUAAU   192

2.5 Zea mays clone 1164740 hypothetical protein mRNA, complete cds NA coding protein psRNATarget