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BaseInfo

ncRNA ID	novel_zma_miR14909
Species	Zea mays
Class	miRNA
Genome position	Chr4:200045027-200045112 [-]
Reference genome	RefGen_v4
Source	SRR1583942
Length	21
Mature sequence(if miRNA)	1 - CCCCUCUAAUCUCCUCCGAUU - 21
Stem-loop(if miRNA)	--C                A        C  AUC        A    CGGAGGAGGUUAGAGG GCUAAAAU UC   UUUAUUCA U    |||||||||||||||| |||||||| ||   ||||||||    GCCUCCUCUAAUCUCC CGAUUUUA AG   GAAUAAGU U UUA                C        A  GAA        U
Stem-loop sequence	CCGGAGGAGGUUAGAGGAGCUAAAAUCUCAUCUUUAUUCAAUUUUGAAUAAGAAGGAAAUUUUAGCCCCUCUAAUCUCCUCCGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008651784.2	ncRNA:21   UUAGCCUCCUCUAAUCUCCCC   1   ||*||||||=||||||||||| targets:671   AACCGGAGGGGAUUAGAGGGG   691 Target Full Sequence	2.5	PREDICTED: Zea mays probable E3 ubiquitin-protein ligase HIP1 (LOC103630734), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_008651781.2	ncRNA:21   UUAGCCUCCUCUAAUCUCCCC   1   ||*||||||=||||||||||| targets:671   AACCGGAGGGGAUUAGAGGGG   691 Target Full Sequence	2.5	PREDICTED: Zea mays probable E3 ubiquitin-protein ligase HIP1 (LOC103630734), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008651780.2	ncRNA:21   UUAGCCUCCUCUAAUCUCCCC   1   ||*||||||=||||||||||| targets:671   AACCGGAGGGGAUUAGAGGGG   691 Target Full Sequence	2.5	PREDICTED: Zea mays probable E3 ubiquitin-protein ligase HIP1 (LOC103630734), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008651782.2	ncRNA:21   UUAGCCUCCUCUAAUCUCCCC   1   ||*||||||=||||||||||| targets:671   AACCGGAGGGGAUUAGAGGGG   691 Target Full Sequence	2.5	PREDICTED: Zea mays probable E3 ubiquitin-protein ligase HIP1 (LOC103630734), transcript variant X3, mRNA	NA	coding protein	psRNATarget
JB163452.1	ncRNA:21   UUAGCCUCCUCUAAUCUCCCC   1   =||||*||||||||=|||||| targets:19   GAUCGAAGGAGAUUGGAGGGG   39 Target Full Sequence	2.5	Sequence 1116 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235121.1	ncRNA:21   UUAGCCUCCUCUAAUCUCCCC   1   =||||*||||||||=|||||| targets:19   GAUCGAAGGAGAUUGGAGGGG   39 Target Full Sequence	2.5	Sequence 1116 from Patent EP2985353	NA	coding protein	psRNATarget
HI402991.1	ncRNA:21   UUAGCCUCCUCUAAUCUCCCC   1   =||||*||||||||=|||||| targets:19   GAUCGAAGGAGAUUGGAGGGG   39 Target Full Sequence	2.5	Sequence 1116 from Patent EP2074227	NA	coding protein	psRNATarget