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BaseInfo

ncRNA ID novel_zma_miR14908
Species Zea mays
Class miRNA
Genome position Chr3:26156300-26156375 [-]
Reference genome RefGen_v4
Source SRR2089706
Length 21
Mature sequence(if miRNA) 56 - UCCUGGGAGGAUUGGAGGGGA - 76
Stem-loop(if miRNA) --                                  UA
  UCCUGGGAGGAUUGGAGGGGAUUGAGGGGGAAAU  G
  ||||||||||||||||||||||||||||||||||
  AGGGCCCUCCUAACCUCCCCUAACUCCCCCUUUA  U
CU                                  UU
Stem-loop sequence UCCUGGGAGGAUUGGAGGGGAUUGAGGGGGAAAUUAGUUUAUUUCCCCCUCAAUCCCCUCCAAUCCUCCCGGGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241793.1
ncRNA:21   AGGGGAGGUUAGGAGGGUCCU   1
  ||||||=||||||||||=|||
targets:77   UCCCCUUCAAUCCUCCCGGGA   97

2.5 Sequence 7788 from Patent EP2985353 NA coding protein psRNATarget
HI409663.1
ncRNA:21   AGGGGAGGUUAGGAGGGUCCU   1
  ||||||=||||||||||=|||
targets:77   UCCCCUUCAAUCCUCCCGGGA   97

2.5 Sequence 7788 from Patent EP2074227 NA coding protein psRNATarget
JB170124.1
ncRNA:21   AGGGGAGGUUAGGAGGGUCCU   1
  ||||||=||||||||||=|||
targets:77   UCCCCUUCAAUCCUCCCGGGA   97

2.5 Sequence 7788 from Patent EP2559767 NA coding protein psRNATarget
EU961132.1
ncRNA:21   AGGGGAGGUUAGGAGGGUCCU   1
  ||||||=||||||||||=|||
targets:831   UCCCCUUCAAUCCUCCCGGGA   851

2.5 Zea mays clone 232865 phospholipid hydroperoxide glutathione peroxidase mRNA, complete cds NA coding protein psRNATarget
BT040716.2
ncRNA:21   AGGGGAGGUUAGGAGGGUCCU   1
  ||||||=||||||||||=|||
targets:870   UCCCCUUCAAUCCUCCCGGGA   890

2.5 Zea mays full-length cDNA clone ZM_BFc0120F10 mRNA, complete cds NA coding protein psRNATarget
BT066291.1
ncRNA:21   AGGGGAGGUUAGGAGGGUCCU   1
  ||||||=||||||||||=|||
targets:875   UCCCCUUCAAUCCUCCCGGGA   895

2.5 Zea mays full-length cDNA clone ZM_BFc0176M03 mRNA, complete cds NA coding protein psRNATarget
NM_001147738.1
ncRNA:21   AGGGGAGGUUAGGAGGGUCCU   1
  ||||||=||||||||||=|||
targets:875   UCCCCUUCAAUCCUCCCGGGA   895

2.5 Zea mays putative glutathione peroxidase (LOC100273297), mRNA NA coding protein psRNATarget