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BaseInfo

ncRNA ID novel_zma_miR14906
Species Zea mays
Class miRNA
Genome position Chr3:62824442-62824503 [-]
Reference genome RefGen_v4
Source SRR2089706
Length 24
Mature sequence(if miRNA) 39 - CAGGUGCAUCUACAGGAUUGUCCG - 62
Stem-loop(if miRNA) --C    G         GAU     GAG    
   AGGU CAUCUACAG   UGUCC   GUCCG
   |||| |||||||||   |||||   ||||A
   UCCG GUAGAUGUC   ACAGG   CAGGU
UAA    G         --A     -AA    
Stem-loop sequence CAGGUGCAUCUACAGGAUUGUCCGAGGUCCGAUGGACAAGGACAACUGUAGAUGGGCCUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU944965.1
ncRNA:24   GCC-UGUUAGGACAUCUACGUGGAC   1
  =||-|=||||*||||||||=|||||
targets:575   UGGCAUAAUCAUGUAGAUGUACCUG   599

2.5 Zea mays clone 236439 mRNA sequence NA coding protein psRNATarget
XM_008646890.2
ncRNA:24   GCC-UGUUAGGACAUCUACGUGGAC   1
  =||-|=||||*||||||||=|||||
targets:1690   UGGCAUAAUCAUGUAGAUGUACCUG   1714

2.5 PREDICTED: Zea mays hypothetical protein (LOC103626480), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008646889.2
ncRNA:24   GCC-UGUUAGGACAUCUACGUGGAC   1
  =||-|=||||*||||||||=|||||
targets:1719   UGGCAUAAUCAUGUAGAUGUACCUG   1743

2.5 PREDICTED: Zea mays hypothetical protein (LOC103626480), transcript variant X1, mRNA NA coding protein psRNATarget