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BaseInfo

ncRNA ID	novel_zma_miR14901
Species	Zea mays
Class	miRNA
Genome position	Chr3:176559721-176559944 [-]
Reference genome	RefGen_v4
Source	SRR2089706
Length	24
Mature sequence(if miRNA)	1 - CCAGAUGGGUUGGCGCAAGACGGA - 24
Stem-loop(if miRNA)	--   G C                                                  C           C     A     A     -----A   CG UC     --U    U   CGU U GCGCCGACCCAUCUGGGCUGGGACACGCAGCGACAAUUUACUCGUCGGUC AGGGACCCCCC GGGUC AAACG CGACA      UAC  G  CAUGA   AGGU C   ||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||      |||  |  |||||   |||| A   GCA A CGCGGUUGGGUAGACCCGACCCUGUGCGUCGCUGUUAAAUGAGCAGCCAG UCCCUGGGGGG CCCAG UUUGU GCUGU      AUG  C  GUAUU   UUCG U AG   G A                                                  A           C     C     G     GACCAG   AU GU     UAU    U
Stem-loop sequence	CGUGUCGCGCCGACCCAUCUGGGCUGGGACACGCAGCGACAAUUUACUCGUCGGUCCAGGGACCCCCCCGGGUCAAAACGACGACAAUACCGGUCCAUGAUAGGUUCAUUGCUUUAUUUAUGUGCUAGUAGACCAGUGUCGGUGUUUCGACCCCGGGGGGUCCCUAGACCGACGAGUAAAUUGUCGCUGCGUGUCCCAGCCCAGAUGGGUUGGCGCAAGACGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU940899.1	ncRNA:24   AGGCAGAACGCGGUUGGGUAGACC   1   |||||||||||||=|||||||||| targets:1892   UCCGUCUUGCGCCGACCCAUCUGG   1915 Target Full Sequence	1.5	Zea mays clone 1168123 mRNA sequence	NA	coding protein	psRNATarget
XM_020541624.1	ncRNA:24   AGGCAGAACGCGGUUGGGUAGACC   1   |||||||||||||=|||||||||| targets:1886   UCCGUCUUGCGCCGACCCAUCUGG   1909 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103644648 (LOC103644648), mRNA	NA	coding protein	psRNATarget
XM_020541001.1	ncRNA:24   AGGCAGAACGCGGUUGGGUAGACC   1   |||||||*|||||=|||||||||| targets:6075   UCCGUCUCGCGCCGACCCAUCUGG   6098 Target Full Sequence	2.5	PREDICTED: Zea mays plasma membrane ATPase 2-like (LOC103632998), transcript variant X36, mRNA	NA	coding protein	psRNATarget
BT017984.1	ncRNA:24   AGGCAGAACGCGGUUGGGUAGACC   1   *||||||*|||||=|||||||||| targets:297   CCCGUCUCGCGCCGACCCAUCUGG   320 Target Full Sequence	2.5	Zea mays clone EL01N0525E01.c mRNA sequence	NA	coding protein	psRNATarget
XM_008654039.1	ncRNA:24   AGGCAGAACGCGGUUGGGUAGACC   1   |||*|||*|||||=|||||||||| targets:1189   UCCAUCUCGCGCCGACCCAUCUGG   1212 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103632220 (LOC103632220), mRNA	NA	coding protein	psRNATarget
BT018612.1	ncRNA:24   AGGCAGAACGCGGUUGGGUAGACC   1   ||*|*||*|||||=|||||||||| targets:294   UCGGCCUCGCGCCGACCCAUCUGG   317 Target Full Sequence	2.5	Zea mays clone EL01N0501C03.d mRNA sequence	NA	coding protein	psRNATarget