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BaseInfo

ncRNA ID novel_zma_miR14889
Species Zea mays
Class miRNA
Genome position Chr3:157462050-157462167 [+]
Reference genome RefGen_v4
Source SRR2089706
Length 24
Mature sequence(if miRNA) 1 - GCGGCUGUAGGAGCGACCCGGCGU - 24
Stem-loop(if miRNA) --      -  A G      CC   -   GAC     C UUUCGAACCUCACCUGCGACAG
  GCGGCU GU G AGCGAC  GGC GUG   GAGGU C                      C
  |||||| || | ||||||  ||| |||   ||||| |
  CGUCGA CA C UUGCUG  CUG CAC   GGAUG U                      G
CC      G  - G      -U   A   GGA     G UACUUGAGCGAGUGGAACGACA
Stem-loop sequence GCGGCUGUAGGAGCGACCCGGCGUGGACGAGGUCCUUUCGAACCUCACCUGCGACAGCGACAGCAAGGUGAGCGAGUUCAUUGGUAGGAGGCACAGUCUGUCGUUGCACGAGCUGCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ062725.1
ncRNA:24   UGCGGCCCAGCGAGGAUGUCGGCG   1
  ||||||||||||||||||||||*|
targets:90   ACGCCGGGUCGCUCCUACAGCCAC   113

1.5 TSA: Zea mays contig63847, mRNA sequence NA coding protein psRNATarget