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BaseInfo

ncRNA ID novel_zma_miR14877
Species Zea mays
Class miRNA
Genome position Chr3:75725246-75725313 [-]
Reference genome RefGen_v4
Source SRR2089705
Length 22
Mature sequence(if miRNA) 47 - GCGACUCUGUUGAUUUUGGCGU - 68
Stem-loop(if miRNA) --G     -    UG       CGUGU     -A  A
   CGACU CUGU  AUUUUGG     CGCGG  UG U
   ||||| ||||  |||||||     |||||  ||
   GUUGG GACG  UAGAACU     GCGCC  AC G
UGG     C    UA       ----U     CG  U
Stem-loop sequence GCGACUCUGUUGAUUUUGGCGUGUCGCGGAUGAUGUCAGCCCGCGUUCAAGAUAUGCAGCGGUUGGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008651141.2
ncRNA:22   UGCGGUUUUAGUUGUCUCAGCG   1
  *=*||||*=||||||||||||=
targets:1517   CUCCCAAUGUCAACAGAGUCGU   1538

3.0 PREDICTED: Zea mays aspartic proteinase oryzasin-1 (LOC103630050), mRNA NA coding protein psRNATarget