ncRNA ID | novel_zma_miR14869 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:56768905-56769076 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583941 |
Length | 25 |
Mature sequence(if miRNA) | 148 - UUGGAGCAAACCCGGUUUUGGACGG - 172 |
Stem-loop(if miRNA) |
--   A        A   -      ACC  U   UG C    C               -CAC  GGGUUCCCGAACUUGACAUGCAG   GUC AAAACCGG UUU CUUCAA   AG UGU  A GUGG GUGUCAUGUUGGAGU    UU                       U   ||| |||||||| ||| ||||||   || |||  | |||| |||||||||||||||    ||                       G   CAG UUUUGGCC AAA GAGGUU   UC ACA  U CACC CACGGUGCAACCUCG    GU                       U GG   G        C   C      -GA  U   GU A    A               UAUG  UACUUACAAGCUCCUGGGUUCAC |
Stem-loop sequence | GUCAAAAACCGGAUUUCUUCAAACCAGUUGUUGACGUGGCGUGUCAUGUUGGAGUCACUUGGGUUCCCGAACUUGACAUGCAGUGUCACUUGGGUCCUCGAACAUUCAUUGGUAUGCUCCAACGUGGCACACCACAUUGACAUCUAGUUGGAGCAAACCCGGUUUUGGACGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT087390.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0059O03 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_020539025.1 |
|
2.5 | PREDICTED: Zea mays DNA dependent RNA polymerase D largest subunit (LOC100501057), transcript variant X1, mRNA | NA | coding protein | psRNATarget |