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BaseInfo

ncRNA ID	novel_zma_miR14863
Species	Zea mays
Class	miRNA
Genome position	Chr10:39355215-39355299 [-]
Reference genome	RefGen_v4
Source	SRR2089705
Length	24
Mature sequence(if miRNA)	1 - GAUUGAAGUCUGGAGCGAGCUGGU - 24
Stem-loop(if miRNA)	--     U  U    ACU   --   UUGGGAUUUCUUGGGGAUG   UAGCU CG CUUC   UGA  UUC                   C   ||||| || ||||   |||  |||                   A   GUCGA GC GAGG   CUG  GUU                   C UG     -  -    --U   AA   AGCAACCAGCAGCAGCAAG
Stem-loop sequence	UAGCUUCGUCUUCACUUGAUUCUUGGGAUUUCUUGGGGAUGCACGAACGACGACGACCAACGAUUGAAGUCUGGAGCGAGCUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ110754.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||||||||||||||||||| targets:15   ACCAGCUCGCUCCAGACUUCAAUC   38 Target Full Sequence	0.0	TSA: Zea mays contig46415, mRNA sequence	NA	coding protein	psRNATarget
BT083866.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||||||||||||||||||| targets:1087   ACCAGCUCGCUCCAGACUUCAAUC   1110 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0049E07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001177142.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||||||||||||||||||| targets:1087   ACCAGCUCGCUCCAGACUUCAAUC   1110 Target Full Sequence	0.0	Zea mays uncharacterized LOC100384657 (LOC100384657), mRNA	NA	coding protein	psRNATarget
XM_008672481.2	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||||||||||||||||||= targets:951   ACCAGCUCGCUCCAGACUUCAAUU   974 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103647974 (LOC103647974), mRNA	NA	coding protein	psRNATarget
EU945192.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||||||||||||||||||= targets:956   ACCAGCUCGCUCCAGACUUCAAUU   979 Target Full Sequence	1.0	Zea mays clone 244055 mRNA sequence	NA	coding protein	psRNATarget
BT033422.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||||||||||||||||||= targets:1119   ACCAGCUCGCUCCAGACUUCAAUU   1142 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0101B10 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001136787.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||||||||||||||||||= targets:1119   ACCAGCUCGCUCCAGACUUCAAUU   1142 Target Full Sequence	1.0	Zea mays uncharacterized LOC100191353 (LOC100191353), mRNA	NA	coding protein	psRNATarget
EU960057.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||||||||||||||||||= targets:1207   ACCAGCUCGCUCCAGACUUCAAUU   1230 Target Full Sequence	1.0	Zea mays clone 221503 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020551856.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   ||||||||||||||||=||||||| targets:1673   ACCAGCUCGCUCCAGAUUUCAAUC   1696 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109945534 (LOC109945534), mRNA	NA	coding protein	psRNATarget
BT054032.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   ||||||||||||=||||||||||| targets:1149   ACCAGCUCGCUCUAGACUUCAAUC   1172 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0145E17 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152342.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   ||||||||||||=||||||||||| targets:1149   ACCAGCUCGCUCUAGACUUCAAUC   1172 Target Full Sequence	1.5	Zea mays uncharacterized LOC100279321 (LOC100279321), mRNA	NA	coding protein	psRNATarget
EZ112276.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||=*||||||||||||||| targets:232   ACCAGCUUACUCCAGACUUCAAUC   255 Target Full Sequence	2.0	TSA: Zea mays contig47937, mRNA sequence	NA	coding protein	psRNATarget
EU967921.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||=*||||||||||||||| targets:1306   ACCAGCUUACUCCAGACUUCAAUC   1329 Target Full Sequence	2.0	Zea mays clone 311294 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT083652.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||=|=*||||||||||||||| targets:970   ACCAGUUUACUCCAGACUUCAAUC   993 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0025E04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001177073.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||=|=*||||||||||||||| targets:970   ACCAGUUUACUCCAGACUUCAAUC   993 Target Full Sequence	3.0	Zea mays uncharacterized LOC100384561 (LOC100384561), mRNA	NA	coding protein	psRNATarget
EU943106.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   ||||||*|||||*||||||||||| targets:1100   ACCAGCCCGCUCAAGACUUCAAUC   1123 Target Full Sequence	2.5	Zea mays clone 1562052 mRNA sequence	NA	coding protein	psRNATarget
EZ082149.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||=*|*||||||||||||| targets:168   ACCAGCUUACCCCAGACUUCAAUC   191 Target Full Sequence	3.0	TSA: Zea mays contig17791, mRNA sequence	NA	coding protein	psRNATarget
NM_001147136.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||=*|*||||||||||||| targets:1018   ACCAGCUUACCCCAGACUUCAAUC   1041 Target Full Sequence	3.0	Zea mays uncharacterized LOC100272680 (LOC100272680), mRNA	NA	coding protein	psRNATarget
BT039161.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||=*|*||||||||||||| targets:1018   ACCAGCUUACCCCAGACUUCAAUC   1041 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0377P11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020550679.1	ncRNA:24   UGGUCGAGCGAGGUCUGAAGUUAG   1   |||||||=*|*||||||||||||| targets:1409   ACCAGCUUACCCCAGACUUCAAUC   1432 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC109944935 (LOC109944935), mRNA	NA	coding protein	psRNATarget