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BaseInfo

ncRNA ID novel_zma_miR14862
Species Zea mays
Class miRNA
Genome position Chr2:207355314-207355400 [-]
Reference genome RefGen_v4
Source SRR2089705
Length 24
Mature sequence(if miRNA) 1 - CUAGGACACUCGGCAAAGACGCCG - 24
Stem-loop(if miRNA) --GAU             CUGG  -GAAA               U
     UCUUUGCCGAGUG    CC     GACACUCGGUAAAGG A
     |||||||||||||    ||     ||||||||||||||| A
     AGAAACGGCUCAC    GG     CUGUGAGCCGUUUCC C
GCCGC             ---A  AUCCA               U
Stem-loop sequence GAUUCUUUGCCGAGUGCUGGCCGAAAGACACUCGGUAAAGGUAACUCCUUUGCCGAGUGUCACCUAGGACACUCGGCAAAGACGCCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952231.1
ncRNA:24   GCCGCAGAAACGGCUCACAGGAUC   1
  ******|||||||||||||||*||
targets:1442   AAAAUACUUUGCCGAGUGUCCAAG   1465

2.5 Zea mays clone 1234152 mRNA sequence NA coding protein psRNATarget
EU951420.1
ncRNA:24   GCCG-CAGAAACGGCUCACAGGAUC   1
  *||=-||||*|||||||||||*|||
targets:346   AGGUUGUCUCUGCCGAGUGUCGUAG   370

2.5 Zea mays clone 701735 mRNA sequence NA coding protein psRNATarget
BT042352.1
ncRNA:24   GCCGCAGAAACGGCUCACAGGAUC   1
  =*||-|||||||||||||||*||*
targets:1202   UAGC-UCUUUGCCGAGUGUCAUAU   1224

2.5 Zea mays full-length cDNA clone ZM_BFb0207J05 mRNA, complete cds NA coding protein psRNATarget
NM_001148473.2
ncRNA:24   GCCGCAGAAACGGCUCACAGGAUC   1
  =*||-|||||||||||||||*||*
targets:1252   UAGC-UCUUUGCCGAGUGUCAUAU   1274

2.5 Zea mays Protein CHLORORESPIRATORY REDUCTION 6 chloroplastic (si707021b11), mRNA NA coding protein psRNATarget