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BaseInfo

ncRNA ID	novel_zma_miR14860
Species	Zea mays
Class	miRNA
Genome position	Chr3:219198794-219198885 [+]
Reference genome	RefGen_v4
Source	SRR1583942
Length	24
Mature sequence(if miRNA)	69 - GUAUCUAGAAAUGCCAAAACGUCU - 92
Stem-loop(if miRNA)	--  A       U             ------  CUUUUACUAUACACU   AC UUUUGGC UUUCUAGAUACAU      AG               U   || ||||||| |||||||||||||      ||   UG AAAACCG AAAGAUCUAUGUG      AU               A UC  C       U             ACAUAU  CUAUAUUACAUAUAG
Stem-loop sequence	ACAUUUUGGCUUUUCUAGAUACAUAGCUUUUACUAUACACUUAGAUAUACAUUAUAUCUAUAUACAGUGUAUCUAGAAAUGCCAAAACGUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008678875.2	ncRNA:24   UCUGCAAAACCGUAAAGAUCUAUG   1   |||||||||||||||||||||||| targets:1747   AGACGUUUUGGCAUUUCUAGAUAC   1770 Target Full Sequence	0.0	PREDICTED: Zea mays beta-1,3-galactosyltransferase sqv-2 (LOC100283067), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU945560.1	ncRNA:24   UCUGCAAAACCGUAAAGAUCUAUG   1   |||=||||||||||||||||=||| targets:780   AGAUGUUUUGGCAUUUCUAGGUAC   803 Target Full Sequence	1.5	Zea mays clone 277684 mRNA sequence	NA	coding protein	psRNATarget
BT039099.1	ncRNA:24   UCUGCAAAACCGUAAAGAUCUAUG   1   |||||||*||||*||||||||||| targets:867   AGACGUUCUGGCUUUUCUAGAUAC   890 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0370L15 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020541969.1	ncRNA:24   UCUGCAAAACCGUAAAGAUCUAUG   1   =|||||*|||||*||||||||||| targets:1650   GGACGUCUUGGCUUUUCUAGAUAC   1673 Target Full Sequence	2.5	PREDICTED: Zea mays RING/U-box superfamily protein (AY109699), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT087422.1	ncRNA:24   UCUG-CAAAACCGUAAAGAUCUAUG   1   ||*|-||||||||*||||||||||| targets:120   AGUCUGUUUUGGCUUUUCUAGAUAC   144 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0068H06 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008676757.2	ncRNA:24   UCUGCAAAACCGUAAAGAUCUAUG   1   ||**||||||||*||||||||||| targets:174   AGCAGUUUUGGCUUUUCUAGAUAC   197 Target Full Sequence	1.5	PREDICTED: Zea mays inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like (LOC103651148), transcript variant X4, mRNA	NA	coding protein	psRNATarget
BT069751.2	ncRNA:24   UCUGCAAAACCGUAAAGAUCUAUG   1   |*|=|||||*||*||||||||||| targets:1370   AAAUGUUUUAGCUUUUCUAGAUAC   1393 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0275C09 mRNA, complete cds	NA	coding protein	psRNATarget
EU963627.1	ncRNA:24   UCUGCAAAACCGUAAAGAUCUAUG   1   ***=||||||*|*||||||||||| targets:944   UUCUGUUUUGACUUUUCUAGAUAC   967 Target Full Sequence	2.5	Zea mays clone 264931 heat shock protein DnaJ, N-terminal mRNA, complete cds	NA	coding protein	psRNATarget
DQ244408.1	ncRNA:24   UCUGCAAAACCGUAAAGAUCUAUG   1   ***=||||||*|*||||||||||| targets:998   UUCUGUUUUGACUUUUCUAGAUAC   1021 Target Full Sequence	2.5	Zea mays clone 7183 mRNA sequence	NA	coding protein	psRNATarget
NM_001143619.2	ncRNA:24   UCUGCAAAACCGUAAAGAUCUAUG   1   ***=||||||*|*||||||||||| targets:984   UUCUGUUUUGACUUUUCUAGAUAC   1007 Target Full Sequence	2.5	Zea mays heat shock protein DnaJ (LOC100217267), mRNA	NA	coding protein	psRNATarget
BT038243.1	ncRNA:24   UCUGCAAAACCGUAAAGAUCUAUG   1   ***=||||||*|*||||||||||| targets:984   UUCUGUUUUGACUUUUCUAGAUAC   1007 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0221B04 mRNA, complete cds	NA	coding protein	psRNATarget