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BaseInfo

ncRNA ID	novel_zma_miR14859
Species	Zea mays
Class	miRNA
Genome position	Chr1:128989129-128989230 [+]
Reference genome	RefGen_v4
Source	SRR2089705
Length	22
Mature sequence(if miRNA)	81 - CCCGGAGCUCUGGCGAAGACAU - 102
Stem-loop(if miRNA)	--          ACC  -G      --A    AA  --UU  -U   CC   AA   GUCUUCGCCG   GC  CGGGGG   UCGG  CG    CU  AGG  ACC  C   ||||||||||   ||  ||||||   ||||  ||    ||  |||  |||  C   CAGAAGCGGU   CG  GCCCUC   AGCC  GC    GA  UCC  UGG  C UA          -CU  AG      AGA    GC  CUAC  UU   AA   CC
Stem-loop sequence	GUCUUCGCCGACCGCGCGGGGGAUCGGAACGUUCUUAGGCCACCAACCCCCGGUAACCUUUAGCAUCCGCGCCGAAGACUCCCGGAGCUCUGGCGAAGACAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB169200.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:18   AUGUCUUCGCCCGAGCUCCGGG   39 Target Full Sequence	1.5	Sequence 6864 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240910.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:18   AUGUCUUCGCCCGAGCUCCGGG   39 Target Full Sequence	1.5	Sequence 6905 from Patent EP2985353	NA	coding protein	psRNATarget
JB169241.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:18   AUGUCUUCGCCCGAGCUCCGGG   39 Target Full Sequence	1.5	Sequence 6905 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240869.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:18   AUGUCUUCGCCCGAGCUCCGGG   39 Target Full Sequence	1.5	Sequence 6864 from Patent EP2985353	NA	coding protein	psRNATarget
HI408780.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:18   AUGUCUUCGCCCGAGCUCCGGG   39 Target Full Sequence	1.5	Sequence 6905 from Patent EP2074227	NA	coding protein	psRNATarget
HI408739.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:18   AUGUCUUCGCCCGAGCUCCGGG   39 Target Full Sequence	1.5	Sequence 6864 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241714.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:18   AUGUCUUCGCCCGAGCUCCGGG   39 Target Full Sequence	1.5	Sequence 7709 from Patent EP2985353	NA	coding protein	psRNATarget
JB170045.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:18   AUGUCUUCGCCCGAGCUCCGGG   39 Target Full Sequence	1.5	Sequence 7709 from Patent EP2559767	NA	coding protein	psRNATarget
HI409584.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:18   AUGUCUUCGCCCGAGCUCCGGG   39 Target Full Sequence	1.5	Sequence 7709 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240834.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:150   AUGUCUUCGCCCGAGCUCCGGG   171 Target Full Sequence	1.5	Sequence 6829 from Patent EP2985353	NA	coding protein	psRNATarget
HI408704.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:150   AUGUCUUCGCCCGAGCUCCGGG   171 Target Full Sequence	1.5	Sequence 6829 from Patent EP2074227	NA	coding protein	psRNATarget
JB169165.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:150   AUGUCUUCGCCCGAGCUCCGGG   171 Target Full Sequence	1.5	Sequence 6829 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240957.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:151   AUGUCUUCGCCCGAGCUCCGGG   172 Target Full Sequence	1.5	Sequence 6952 from Patent EP2985353	NA	coding protein	psRNATarget
JB169288.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:151   AUGUCUUCGCCCGAGCUCCGGG   172 Target Full Sequence	1.5	Sequence 6952 from Patent EP2559767	NA	coding protein	psRNATarget
HI408827.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:151   AUGUCUUCGCCCGAGCUCCGGG   172 Target Full Sequence	1.5	Sequence 6952 from Patent EP2074227	NA	coding protein	psRNATarget
BT055126.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:14   AUGUCUUCGCCCGAGCUCCGGG   35 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0068E02 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020547267.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:14   AUGUCUUCGCCCGAGCUCCGGG   35 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109943773 (LOC109943773), mRNA	NA	coding protein	psRNATarget
XM_020546301.1	ncRNA:22   UACAGAAGCGGUCUCGAGGCCC   1   |||||||||||*|||||||||| targets:3577   AUGUCUUCGCCCGAGCUCCGGG   3598 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109943356 (LOC109943356), mRNA	NA	coding protein	psRNATarget