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BaseInfo

ncRNA ID	novel_zma_miR14847
Species	Zea mays
Class	miRNA
Genome position	Chr1:306908248-306908456 [-]
Reference genome	RefGen_v4
Source	SRR2089705
Length	21
Mature sequence(if miRNA)	1 - UCAACGGCGUCAUAUAUUUAA - 21
Stem-loop(if miRNA)	--                       -UUU     -       UG  GG            ---------           UUA   UUUAUUU    AU   UU UU   U   AAAUAUAUGACGUUGUUGACUUU    AAAAA CUUUGAC  CU  UCUUAUUCAGAA         AAAAAUGUGAA   UCA       UGCU  GAU  G  UUA C   |||||||||||||||||||||||    ||||| |||||||  ||  ||||||||||||         |||||||||||   |||       ||||  |||  |  ||| A   UUUAUAUACUGCGGCAACUGAAA    UUUUU GAAACUG  GA  GGAAUAAGUUUU         UUUUUACAUUU   AGU       ACGA  UUG  U  AAU C AA                       UUUU     A       GU  GU            AUAAAUAAG           UGA   --UCAGU    CU   -U GG   U
Stem-loop sequence	AAAUAUAUGACGUUGUUGACUUUUUUAAAAACUUUGACUGCUGGUCUUAUUCAGAAAAAAAUGUGAAUUAUCAUUUAUUUUGCUAUGAUUUGUUUUAUCACUUAAGGUUGUUUCAGCAUGACUUGAAGUUUUACAUUUUUGAAUAAAUAUUUUGAAUAAGGUGAGUGGUCAAAGAUUUUUUUUUAAAGUCAACGGCGUCAUAUAUUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163865.1	ncRNA:21   AAUUUAUAUACUGCGGCAACU   1   |||||||||||||*||||||| targets:11   UUAAAUAUAUGACACCGUUGA   31 Target Full Sequence	1.5	Sequence 1529 from Patent EP2559767	NA	coding protein	psRNATarget
HI403404.1	ncRNA:21   AAUUUAUAUACUGCGGCAACU   1   |||||||||||||*||||||| targets:11   UUAAAUAUAUGACACCGUUGA   31 Target Full Sequence	1.5	Sequence 1529 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235534.1	ncRNA:21   AAUUUAUAUACUGCGGCAACU   1   |||||||||||||*||||||| targets:11   UUAAAUAUAUGACACCGUUGA   31 Target Full Sequence	1.5	Sequence 1529 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008675383.2	ncRNA:21   AAUUUAUAUACUGCGGCAACU   1   *||||||||||||*||||||| targets:1215   GUAAAUAUAUGACACCGUUGA   1235 Target Full Sequence	1.5	PREDICTED: Zea mays plant cysteine oxidase 1 (LOC103649652), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008675384.2	ncRNA:21   AAUUUAUAUACUGCGGCAACU   1   *||||||||||||*||||||| targets:1216   GUAAAUAUAUGACACCGUUGA   1236 Target Full Sequence	1.5	PREDICTED: Zea mays plant cysteine oxidase 1 (LOC103649652), transcript variant X2, mRNA	NA	coding protein	psRNATarget