Search result

BaseInfo

ncRNA ID	novel_zma_miR14842
Species	Zea mays
Class	miRNA
Genome position	Chr9:1563135-1563194 [-]
Reference genome	RefGen_v4
Source	SRR2089705
Length	24
Mature sequence(if miRNA)	37 - UACCCACAGGUAUAGUCGCGGACG - 60
Stem-loop(if miRNA)	--         G    G      -A -   U   UACCCACAG UAUA UCGCGG  C GGA A   ||||||||| |||| ||||||  | |||   GUGGGUGUU AUAU AGUGCC  G UCU U AG         G    A      AG A   A
Stem-loop sequence	UACCCACAGGUAUAGUCGCGGACGGAUAUAUCUAGGACCGUGAAUAUAGUUGUGGGUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT061668.1	ncRNA:24   GCAGGCGCUGAUAUGGACACCCAU   1   ||*|||||||||||||||*||||| targets:1186   CGCCCGCGACUAUACCUGCGGGUA   1209 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0172G14 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020543402.1	ncRNA:24   GCAGGCGCUGAUAUGGACACCCAU   1   ||*|||||||||||||||*||||| targets:989   CGCCCGCGACUAUACCUGCGGGUA   1012 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100381574 (LOC100381574), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020543401.1	ncRNA:24   GCAGGCGCUGAUAUGGACACCCAU   1   ||*|||||||||||||||*||||| targets:1484   CGCCCGCGACUAUACCUGCGGGUA   1507 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100381574 (LOC100381574), transcript variant X1, mRNA	NA	coding protein	psRNATarget