ncRNA ID | novel_zma_miR14835 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:141752013-141752209 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089705 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAACCGGAGGGAAUUGAAGGGGC - 24 |
Stem-loop(if miRNA) |
--              -UU  ----------A GG   AAAAUCUCCCUCUUAUUCAAUUGGUAACCUUAAACCCCCUUCGGGAUUGGAGGGAAUUGAGGUGGAA   AAAACCGGAGGGAA   GA           G  GCU                                                                   A   ||||||||||||||   ||           |  |||   UUUUGGCCUCUCUU   CU           G  GGA                                                                   U GG              UAU  CCGCAAUCUUA --   AGAAUCCCGAUCAAACCUUUGAUUUUAGAGGAAACCCUAACUUCCUCUAACCCUUCCUUUAAUCAAG |
Stem-loop sequence | AAAACCGGAGGGAAUUGAAGGGGCUAAAAUCUCCCUCUUAUUCAAUUGGUAACCUUAAACCCCCUUCGGGAUUGGAGGGAAUUGAGGUGGAAAUGAACUAAUUUCCUUCCCAAUCUCCUUCAAUCCCAAAGGAGAUUUUAGUUUCCAAACUAGCCCUAAGAAGGGAUUCUAACGCCUCUAUUUCUCUCCGGUUUUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008654495.2 |
|
1.5 | PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA | NA | coding protein | psRNATarget | |||||||||
EU957568.1 |
|
2.5 | Zea mays clone 1597470 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |