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BaseInfo

ncRNA ID	novel_zma_miR14833
Species	Zea mays
Class	miRNA
Genome position	Chr8:101811363-101811528 [+]
Reference genome	RefGen_v4
Source	SRR2089705
Length	21
Mature sequence(if miRNA)	146 - CCUUGAGUGGCUGCAAGAGGA - 166
Stem-loop(if miRNA)	--    -    G  - G  U  ---A       GA   -   ---AAU     CG      G     -A      AA      A   AC   CUCU GCAG CC C CA GG    GAGGGCC  GGC CUC      GCGCU  GAAGUU AGCGG  CGCGCA  CAGCUC UGG  U   |||| |||| || | || ||    |||||||  ||| |||      |||||  |||||| |||||  ||||||  |||||| |||  C   GAGA CGUC GG G GU CC    CUUCCGG  CUG GAG      CGUGA  CUUCAG UCGCC  GCGCGU  GUCGAG GCC  A AG    A    -  U A  U  GUCA       -A   A   CCAGCC     AG      -     AG      GG      C   AU
Stem-loop sequence	CUCUGCAGGCCCGCAUGGAGAGGGCCGAGGCCUCAAUGCGCUCGGAAGUUGAGCGGACGCGCAAACAGCUCAUGGACUCAUACCGCGAGCUGGGUGCGCGGACCGCUGACUUCGAAGUGCCCGACCGAGAGUCAGGCCUUCACUGCCUUGAGUGGCUGCAAGAGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ078633.1	ncRNA:21   AGGAGAACGUCGGUGAGUUCC   1   |=||*|||||||||=|||||| targets:76   UUCUGUUGCAGCCAUUCAAGG   96 Target Full Sequence	2.5	TSA: Zea mays contig14272, mRNA sequence	NA	coding protein	psRNATarget
XM_020552871.1	ncRNA:21   AGGAGAACGUCGGUGAGUUCC   1   |=||*|||||||||=|||||| targets:473   UUCUGUUGCAGCCAUUCAAGG   493 Target Full Sequence	2.5	PREDICTED: Zea mays peroxisomal fatty acid beta-oxidation multifunctional protein (LOC103654691), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001154615.1	ncRNA:21   AGGAGAACGUCGGUGAGUUCC   1   |=||*|||||||||=|||||| targets:464   UUCUGUUGCAGCCAUUCAAGG   484 Target Full Sequence	2.5	Zea mays uncharacterized LOC100281695 (pco097710), mRNA	NA	coding protein	psRNATarget
EU957569.1	ncRNA:21   AGGAGAACGUCGGUGAGUUCC   1   |=||*|||||||||=|||||| targets:464   UUCUGUUGCAGCCAUUCAAGG   484 Target Full Sequence	2.5	Zea mays clone 1597523 peroxisomal fatty acid beta-oxidation multifunctional protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008653806.2	ncRNA:21   AGGAGAACGUCGGUGAGUUCC   1   |=||*|||||||=|||||||| targets:1566   UUCUGUUGCAGCUACUCAAGG   1586 Target Full Sequence	2.5	PREDICTED: Zea mays BURP domain-containing protein 4 (LOC103631954), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020553341.1	ncRNA:21   AGGAGAACGUCGGUGAGUUCC   1   |=||*|||||||||=|||||| targets:710   UUCUGUUGCAGCCAUUCAAGG   730 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100281695 (pco097710), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008653805.2	ncRNA:21   AGGAGAACGUCGGUGAGUUCC   1   |=||*|||||||=|||||||| targets:1824   UUCUGUUGCAGCUACUCAAGG   1844 Target Full Sequence	2.5	PREDICTED: Zea mays BURP domain-containing protein 4 (LOC103631954), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020552872.1	ncRNA:21   AGGAGAACGUCGGUGAGUUCC   1   |=||*|||||||||=|||||| targets:2868   UUCUGUUGCAGCCAUUCAAGG   2888 Target Full Sequence	2.5	PREDICTED: Zea mays peroxisomal fatty acid beta-oxidation multifunctional protein (LOC103654691), transcript variant X2, mRNA	NA	coding protein	psRNATarget