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BaseInfo

ncRNA ID novel_zma_miR14822
Species Zea mays
Class miRNA
Genome position Chr7:90196857-90197002 [-]
Reference genome RefGen_v4
Source SRR2089705
Length 24
Mature sequence(if miRNA) 123 - AAUACAGCUUAUUUUCGUCGGCCC - 146
Stem-loop(if miRNA) --AA    -GC              - C                AUAUUUCC                CCG   AA
    UACA   UUAUUUUCGUCGGC C CGGGGCCGACGAAAAU        UAUUUUCGUGGGUCGG   ACG  A
    ||||   |||||||||||||| | ||||||||||||||||        ||||||||||||||||   |||
    AUGU   AAUAAAAGCAGCCG G GCCCUGGCUGCUUUUA        AUAAAAGCACCCGGUC   UGU  A
UUUA    AUC              A A                --AACCGA                --A   AU
Stem-loop sequence AAUACAGCUUAUUUUCGUCGGCCCCGGGGCCGACGAAAAUAUAUUUCCUAUUUUCGUGGGUCGGCCGACGAAAAUAUGUACUGGCCCACGAAAAUAAGCCAAAUUUUCGUCGGUCCCGAGAGCCGACGAAAAUAACUAUGUAAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT042581.1
ncRNA:24   CCCGGCUGCUUUUAUUCGACAUAA   1
  *||||||||||||||||||*||||
targets:490   AGGCCGACGAAAAUAAGCUAUAUU   513

1.5 Zea mays full-length cDNA clone ZM_BFb0345H15 mRNA, complete cds NA coding protein psRNATarget