ncRNA ID | novel_zma_miR14822 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:90196857-90197002 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089705 |
Length | 24 |
Mature sequence(if miRNA) | 123 - AAUACAGCUUAUUUUCGUCGGCCC - 146 |
Stem-loop(if miRNA) |
--AA    -GC              - C                AUAUUUCC                CCG   AA     UACA   UUAUUUUCGUCGGC C CGGGGCCGACGAAAAU        UAUUUUCGUGGGUCGG   ACG  A     ||||   |||||||||||||| | ||||||||||||||||        ||||||||||||||||   |||     AUGU   AAUAAAAGCAGCCG G GCCCUGGCUGCUUUUA        AUAAAAGCACCCGGUC   UGU  A UUUA    AUC              A A                --AACCGA                --A   AU |
Stem-loop sequence | AAUACAGCUUAUUUUCGUCGGCCCCGGGGCCGACGAAAAUAUAUUUCCUAUUUUCGUGGGUCGGCCGACGAAAAUAUGUACUGGCCCACGAAAAUAAGCCAAAUUUUCGUCGGUCCCGAGAGCCGACGAAAAUAACUAUGUAAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT042581.1 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0345H15 mRNA, complete cds | NA | coding protein | psRNATarget |