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BaseInfo

ncRNA ID novel_zma_miR14810
Species Zea mays
Class miRNA
Genome position Chr3:16311867-16311913 [-]
Reference genome RefGen_v4
Source SRR1583942
Length 22
Mature sequence(if miRNA) 1 - GCCGACUAGCCCAUGUUGGGAC - 22
Stem-loop(if miRNA) --A              C  UA  
   CUAACAUGGGUUGG UC  GCA
   |||||||||||||| ||  ||C
   GGUUGUACCCGAUC AG  CGU
CAG              -  -C  
Stem-loop sequence ACUAACAUGGGUUGGCUCUAGCACUGCCGACUAGCCCAUGUUGGGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008645619.2
ncRNA:22   CAGGGUUGUACCCGAUCAGCCG   1
  ***|||||*|||||*|||||||
targets:707   AGGCCAACCUGGGCGAGUCGGC   728

2.5 PREDICTED: Zea mays vacuolar cation/proton exchanger 2 (LOC100285751), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001158641.1
ncRNA:22   CAGGGUUGUACCCGAUCAGCCG   1
  ***|||||*|||||*|||||||
targets:713   AGGCCAACCUGGGCGAGUCGGC   734

2.5 Zea mays vacuolar cation/proton exchanger 2 (LOC100285751), mRNA NA coding protein psRNATarget
EU973718.1
ncRNA:22   CAGGGUUGUACCCGAUCAGCCG   1
  ***|||||*|||||*|||||||
targets:713   AGGCCAACCUGGGCGAGUCGGC   734

2.5 Zea mays clone 407357 vacuolar cation/proton exchanger 2 mRNA, complete cds NA coding protein psRNATarget