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BaseInfo

ncRNA ID novel_zma_miR14807
Species Zea mays
Class miRNA
Genome position Chr10:133244823-133244920 [+]
Reference genome RefGen_v4
Source SRR2089705
Length 24
Mature sequence(if miRNA) 1 - ACUGUUCGGUUUAGAUUAAAGCAU - 24
Stem-loop(if miRNA) --    UU                AUCU  AA     U U  -      AU
  ACUG  CGGUUUAGAUUAAAGC    AC  UGUUU G CU AUAUAA  U
  ||||  ||||||||||||||||    ||  ||||| | || ||||||  A
  UGAC  GCUAAGUCUAAUUUCG    UG  AUAAA C GA UAUAUU  U
CC    UG                --GU  --     U U  C      GA
Stem-loop sequence ACUGUUCGGUUUAGAUUAAAGCAUCUACAAUGUUUUGUCUAUAUAAAUUAUAGUUAUAUCAGUCUAAAUAGUUGGCUUUAAUCUGAAUCGGUCAGUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008666791.2
ncRNA:24   UA---CGAAAUUAGAUUUGGCUUGUCA   1
  ||---|||||||||||||*|||||||*
targets:1088   AUCUGGCUUUAAUCUAAAGCGAACAGC   1114

2.5 PREDICTED: Zea mays Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (LOC100216707), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008666785.2
ncRNA:24   UA---CGAAAUUAGAUUUGGCUUGUCA   1
  ||---|||||||||||||*|||||||*
targets:1081   AUCUGGCUUUAAUCUAAAGCGAACAGC   1107

2.5 PREDICTED: Zea mays Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (LOC100216707), transcript variant X1, mRNA NA coding protein psRNATarget