ncRNA ID | novel_zma_miR14807 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:133244823-133244920 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089705 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUGUUCGGUUUAGAUUAAAGCAU - 24 |
Stem-loop(if miRNA) |
--    UU                AUCU  AA     U U  -      AU   ACUG  CGGUUUAGAUUAAAGC    AC  UGUUU G CU AUAUAA  U   ||||  ||||||||||||||||    ||  ||||| | || ||||||  A   UGAC  GCUAAGUCUAAUUUCG    UG  AUAAA C GA UAUAUU  U CC    UG                --GU  --     U U  C      GA |
Stem-loop sequence | ACUGUUCGGUUUAGAUUAAAGCAUCUACAAUGUUUUGUCUAUAUAAAUUAUAGUUAUAUCAGUCUAAAUAGUUGGCUUUAAUCUGAAUCGGUCAGUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008666791.2 |
|
2.5 | PREDICTED: Zea mays Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (LOC100216707), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008666785.2 |
|
2.5 | PREDICTED: Zea mays Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (LOC100216707), transcript variant X1, mRNA | NA | coding protein | psRNATarget |