ncRNA ID | novel_zma_miR14789 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:18402271-18402381 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089704 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CUCCGGCUGGGUCGUUGCAGAGU - 23 |
Stem-loop(if miRNA) |
U    ----    A           CCUCUA     AU  UUAAGGCU      U   AC  CUCU    UGAC CAGCCGGAGGG      GCGUA  GG        UCCGAG AGC  C  ||||    |||| |||||||||||      |||||  ||        |||||| |||  G  GAGA    GCUG GUCGGCCUCCC      CGCGU  CC        AGGCUC UCG  C U    CGUU    G           ----AG     --  -UAUAGCU      -   CC |
Stem-loop sequence | UCUCUUGACACAGCCGGAGGGCCUCUAGCGUAAUGGUUAAGGCUUCCGAGUAGCACCGCCCGCUCUCGGAUCGAUAUCCUGCGCGACCCUCCGGCUGGGUCGUUGCAGAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020537580.1 |
|
1.5 | PREDICTED: Zea mays NEDD8-activating enzyme E1 regulatory subunit AXR1 (LOC542169), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
BT018647.1 |
|
1.5 | Zea mays clone EL01N0505E03.d mRNA sequence | NA | coding protein | psRNATarget |