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BaseInfo

ncRNA ID novel_zma_miR14785
Species Zea mays
Class miRNA
Genome position Chr2:42081167-42081251 [+]
Reference genome RefGen_v4
Source SRR2089704
Length 24
Mature sequence(if miRNA) 62 - CCGUGGACACUCGGCAAAGCCGCC - 85
Stem-loop(if miRNA) --               CUG  -   AA               U
  CGGCUUUGCCGAGUG   CC UGG  GACACUCGGCAAAGA A
  |||||||||||||||   || |||  ||||||||||||||| U
  GCCGAAACGGCUCAC   GG GCC  CUGUGAGCCGUUUCU C
CC               --A  U   -A               U
Stem-loop sequence CGGCUUUGCCGAGUGCUGCCUGGAAGACACUCGGCAAAGAUAUCUUCUUUGCCGAGUGUCACCGUGGACACUCGGCAAAGCCGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952231.1
ncRNA:24   CCGCCGAAACGGCUCACAGGUGCC   1
  *****||||||||||||||||*||
targets:1443   AAAUACUUUGCCGAGUGUCCAAGG   1466

1.5 Zea mays clone 1234152 mRNA sequence NA coding protein psRNATarget