ncRNA ID | novel_zma_miR14774 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:259071542-259071736 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089704;SRR2089706 |
Length | 23 |
Mature sequence(if miRNA) | 173 - AAAAUGGAUUUCCACUGGCGGUU - 195 |
Stem-loop(if miRNA) |
--A    GG                     -UAAA                                     AA    AGAU             AAU    AAAU  AUUUCCACUGGCGGUUGUCUU     AACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUU  GUUA    AACCGCCAGUGGA   C    ||||  |||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||  ||||    |||||||||||||    UUUG  UAAAGGUGACCGCCAAUAGAA     UUGGCGGUCACCUUUAUCCUACAAAGGUGACCGCCAA  CAAU    UUGGCGGUCACUU   A ACC    GA                     UUGUG                                     CA    GUGU             GUA |
Stem-loop sequence | AAAAUGGAUUUCCACUGGCGGUUGUCUUUAAAAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUAAGUUAAGAUAACCGCCAGUGGAAAUCAAUGUUCACUGGCGGUUUGUGUAACACAACCGCCAGUGGAAACAUCCUAUUUCCACUGGCGGUUGUGUUAAGAUAACCGCCAGUGGAAAUAGGUUUCCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001176701.1 |
|
1.5 | Zea mays uncharacterized LOC100384113 (LOC100384113), mRNA | NA | coding protein | psRNATarget | |||||||||
BT069194.2 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0304H22 mRNA, complete cds | NA | coding protein | psRNATarget |