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BaseInfo

ncRNA ID	novel_zma_miR14768
Species	Zea mays
Class	miRNA
Genome position	Chr1:248981549-248981596 [+]
Reference genome	RefGen_v4
Source	SRR2089704
Length	21
Mature sequence(if miRNA)	28 - CGGUGCGCCAGGCUGGUCGAC - 48
Stem-loop(if miRNA)	--A CU   A      A      A    G  CGG CCUGGC CACCGG C    |  ||| |||||| |||||| U    C  GUC GGACCG GUGGCC G CAG UG   -      C      U
Stem-loop sequence	AGCUCGGACCUGGCACACCGGACUGUCCGGUGCGCCAGGCUGGUCGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001175687.1	ncRNA:21   CAGCU-GGUCGGACCGCGUGGC   1   *||||-|||||||||||||||| targets:785   CUCGAGCCAGCCUGGCGCACCG   806 Target Full Sequence	2.0	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
BT065921.2	ncRNA:21   CAGCU-GGUCGGACCGCGUGGC   1   *||||-|||||||||||||||| targets:785   CUCGAGCCAGCCUGGCGCACCG   806 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
BT066013.2	ncRNA:21   CAGCUGGUCGGACCGCGUGGC   1   |**|||||||||||||||||| targets:770   GGAGACCAGCCUGGCGCACCG   790 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175715.1	ncRNA:21   CAGCUGGUCGGACCGCGUGGC   1   |**|||||||||||||||||| targets:770   GGAGACCAGCCUGGCGCACCG   790 Target Full Sequence	1.0	Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA	NA	coding protein	psRNATarget
EU955909.1	ncRNA:21   CAGCUGGUCGGACCGCGUGGC   1   |*=||||=||||||||||||| targets:440   GAUGACCGGCCUGGCGCACCG   460 Target Full Sequence	2.0	Zea mays clone 1551657 cytochrome P450 CYP78A52 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001159623.2	ncRNA:21   CAGCUGGUCGGACCGCGUGGC   1   |*=||||=||||||||||||| targets:381   GAUGACCGGCCUGGCGCACCG   401 Target Full Sequence	2.0	Zea mays cytochrome P450 CYP78A53 (CYP78A53), mRNA	NA	coding protein	psRNATarget
EU957659.1	ncRNA:21   CAGCUGGUCGGACCGCGUGGC   1   |*=||||=||||||||||||| targets:382   GAUGACCGGCCUGGCGCACCG   402 Target Full Sequence	2.0	Zea mays clone 1601442 cytochrome P450 CYP78A53 mRNA, complete cds	NA	coding protein	psRNATarget
EU957638.1	ncRNA:21   CAGCUGGUCGGACCGCGUGGC   1   |*=||||=||||||||||||| targets:394   GAUGACCGGCCUGGCGCACCG   414 Target Full Sequence	2.0	Zea mays clone 1600726 cytochrome P450 CYP78A54 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148789.1	ncRNA:21   CAGCUGGUCGGACCGCGUGGC   1   |*=||||=||||||||||||| targets:323   GAUGACCGGCCUGGCGCACCG   343 Target Full Sequence	2.0	Zea mays putative cytochrome P450 superfamily protein (LOC100274430), mRNA	NA	coding protein	psRNATarget
BT043026.1	ncRNA:21   CAGCUGGUCGGACCGCGUGGC   1   |*=||||=||||||||||||| targets:323   GAUGACCGGCCUGGCGCACCG   343 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0083M15 mRNA, complete cds	NA	coding protein	psRNATarget
EU940974.1	ncRNA:21   CAGCU-GGUCGGACCGCGUGGC   1   *||||-=||||||||||||||| targets:2840   CUCGAAUCAGCCUGGCGCACCG   2861 Target Full Sequence	3.0	Zea mays clone 1225259 mRNA sequence	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:21   CAGCUG-GUCGGACCGCGUGGC   1   |||||*-||||||||||||||| targets:769   GUCGAGGCAGCCUGGCGCACCG   790 Target Full Sequence	3.0	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
BT066811.2	ncRNA:21   CAGCUG-GUCGGACCGCGUGGC   1   |||||*-||||||||||||||| targets:769   GUCGAGGCAGCCUGGCGCACCG   790 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
HI410183.1	ncRNA:19   GCU-GGUCGGACCGCGUGGC   1   |||-=||||||||||||||| targets:1   CGAGUCAGCCUGGCGCACCG   20 Target Full Sequence	3.0	Sequence 8308 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242313.1	ncRNA:19   GCU-GGUCGGACCGCGUGGC   1   |||-=||||||||||||||| targets:1   CGAGUCAGCCUGGCGCACCG   20 Target Full Sequence	3.0	Sequence 8308 from Patent EP2985353	NA	coding protein	psRNATarget
JB170644.1	ncRNA:19   GCU-GGUCGGACCGCGUGGC   1   |||-=||||||||||||||| targets:1   CGAGUCAGCCUGGCGCACCG   20 Target Full Sequence	3.0	Sequence 8308 from Patent EP2559767	NA	coding protein	psRNATarget
EU970938.1	ncRNA:21   CAGCUGGUCGGACCGCGUGGC   1   **=|||*=||||||||||||| targets:372   CAUGACGGGCCUGGCGCACCG   392 Target Full Sequence	3.0	Zea mays clone 354295 40S ribosomal protein S25-1 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020548532.1	ncRNA:21   CAGCUGGUCGGACCGCGUGGC   1   **=|||*=||||||||||||| targets:529   CAUGACGGGCCUGGCGCACCG   549 Target Full Sequence	3.0	PREDICTED: Zea mays cytochrome P450 78A9 (LOC103647610), mRNA	NA	coding protein	psRNATarget