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BaseInfo

ncRNA ID novel_zma_miR14766
Species Zea mays
Class miRNA
Genome position Chr9:43543237-43543431 [+]
Reference genome RefGen_v4
Source SRR2089704;SRR2089706
Length 23
Mature sequence(if miRNA) 1 - AAAAUGGAUUUCCACUGGCGGUU - 23
Stem-loop(if miRNA) --A    GG                     -UAAA                                     AA    AGAU             AAU
   AAAU  AUUUCCACUGGCGGUUGUCUU     AACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUU  GUUA    AACCGCCAGUGGA   C
   ||||  |||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||  ||||    |||||||||||||
   UUUG  UAAAGGUGACCGCCAAUAGAA     UUGGCGGUCACCUUUAUCCUACAAAGGUGACCGCCAA  CAAU    UUGGCGGUCACUU   A
ACC    GA                     UUGUG                                     CA    GUGU             GUA
Stem-loop sequence AAAAUGGAUUUCCACUGGCGGUUGUCUUUAAAAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUAAGUUAAGAUAACCGCCAGUGGAAAUCAAUGUUCACUGGCGGUUUGUGUAACACAACCGCCAGUGGAAACAUCCUAUUUCCACUGGCGGUUGUGUUAAGAUAACCGCCAGUGGAAAUAGGUUUCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001176701.1
ncRNA:23   UUGGCGGUCACCUUUAGGUAAAA   1
  ||||||||||||||||*||||||
targets:854   AACCGCCAGUGGAAAUGCAUUUU   876

1.5 Zea mays uncharacterized LOC100384113 (LOC100384113), mRNA NA coding protein psRNATarget
BT069194.2
ncRNA:23   UUGGCGGUCACCUUUAGGUAAAA   1
  ||||||||||||||||*||||||
targets:854   AACCGCCAGUGGAAAUGCAUUUU   876

1.5 Zea mays full-length cDNA clone ZM_BFb0304H22 mRNA, complete cds NA coding protein psRNATarget