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BaseInfo

ncRNA ID novel_zma_miR14757
Species Zea mays
Class miRNA
Genome position Chr8:25446-25643 [-]
Reference genome RefGen_v4
Source SRR2089704
Length 24
Mature sequence(if miRNA) 1 - GUGUGGCCAUUGAUCGUUGACCAG - 24
Stem-loop(if miRNA) --U                    A    C      -             U   -  AA  A                      A  CCAACUCAAUUUUC
   GUCAAUGAUCAAUGGCCGCA AACC CCAUUU UGUCGAAAAUAGC UGA CG  CA UUUUCAAUAAUACCGAAGGCUA GA              A
   |||||||||||||||||||| |||| |||||| ||||||||||||| ||| ||  || |||||||||||||||||||||| ||              C
   CAGUUGCUAGUUACCGGUGU UUGG GGUAAA ACAGCUUUUAUCG ACU GC  GU AAAAGUUAUUAUGGUUUCCGAU UG              C
GAC                    G    C      C             U   U  GG  -                      G  UAAGAACCUACAGA
Stem-loop sequence UGUCAAUGAUCAAUGGCCGCAAAACCCCCAUUUUGUCGAAAAUAGCUUGACGAACAAUUUUCAAUAAUACCGAAGGCUAAGACCAACUCAAUUUUCACCAGACAUCCAAGAAUGUGUAGCCUUUGGUAUUAUUGAAAAUGGGCGUUCAUGCUAUUUUCGACACAAAUGGCGGUUGUGUGGCCAUUGAUCGUUGACCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235059.1
ncRNA:24   GACCAGUUGCUAGUUACCGGUGUG   1
  ||||||||=|||||||||||||||
targets:30   CUGGUCAAUGAUCAAUGGCCACAC   53

1.0 Sequence 1054 from Patent EP2985353 NA coding protein psRNATarget
HI402929.1
ncRNA:24   GACCAGUUGCUAGUUACCGGUGUG   1
  ||||||||=|||||||||||||||
targets:30   CUGGUCAAUGAUCAAUGGCCACAC   53

1.0 Sequence 1054 from Patent EP2074227 NA coding protein psRNATarget
JB163390.1
ncRNA:24   GACCAGUUGCUAGUUACCGGUGUG   1
  ||||||||=|||||||||||||||
targets:30   CUGGUCAAUGAUCAAUGGCCACAC   53

1.0 Sequence 1054 from Patent EP2559767 NA coding protein psRNATarget