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BaseInfo

ncRNA ID novel_zma_miR14755
Species Zea mays
Class miRNA
Genome position Chr8:44428938-44429055 [-]
Reference genome RefGen_v4
Source SRR2089704
Length 23
Mature sequence(if miRNA) 1 - AAUGGAAUAAAAUAGAGGACUAA - 23
Stem-loop(if miRNA) --    U   C              U                                C
  AGUC CUC AUUUUAUUCUAUUU AGUCUCUAAAUUGUCAAAUACGGAAACUAAAA U
  |||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| C
  UCAG GAG UAAAAUAAGGUAAA UCAGAGAUUUAACGGUUUAUGCCUUUGAUUUU U
AA    -   A              U                                A
Stem-loop sequence AGUCUCUCCAUUUUAUUCUAUUUUAGUCUCUAAAUUGUCAAAUACGGAAACUAAAACUCUAUUUUAGUUUCCGUAUUUGGCAAUUUAGAGACUUAAAUGGAAUAAAAUAGAGGACUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545045.1
ncRNA:23   AAUCAG-GAGAUAAAAUAAGGUAA   1
  ||||||-|||*|||||||||||||
targets:2149   UUAGUCUCUCCAUUUUAUUCCAUU   2172

3.0 PREDICTED: Zea mays CAB2 (LOC100281582), transcript variant X2, mRNA NA coding protein psRNATarget
BT019141.1
ncRNA:23   AAUCAGG-AGAUAAAAUAAGGUAA   1
  |||||||-||*|||||||||||||
targets:292   UUAGUCCCUCCAUUUUAUUCCAUU   315

3.0 Zea mays clone Contig786.F mRNA sequence NA coding protein psRNATarget
LQ238843.1
ncRNA:23   AAUCAGG-AGAUAAAAUAAGGUAA   1
  |||||||-||*|||||||||||||
targets:167   UUAGUCCCUCCAUUUUAUUCCAUU   190

3.0 Sequence 4838 from Patent EP2985353 NA coding protein psRNATarget
JB167174.1
ncRNA:23   AAUCAGG-AGAUAAAAUAAGGUAA   1
  |||||||-||*|||||||||||||
targets:167   UUAGUCCCUCCAUUUUAUUCCAUU   190

3.0 Sequence 4838 from Patent EP2559767 NA coding protein psRNATarget
HI406713.1
ncRNA:23   AAUCAGG-AGAUAAAAUAAGGUAA   1
  |||||||-||*|||||||||||||
targets:167   UUAGUCCCUCCAUUUUAUUCCAUU   190

3.0 Sequence 4838 from Patent EP2074227 NA coding protein psRNATarget
JB166880.1
ncRNA:23   AAUCAGG-AGAUAAAAUAAGGUAA   1
  |||||||-||*|||||||||||||
targets:76   UUAGUCCCUCCAUUUUAUUCCAUU   99

3.0 Sequence 4544 from Patent EP2559767 NA coding protein psRNATarget
HI406419.1
ncRNA:23   AAUCAGG-AGAUAAAAUAAGGUAA   1
  |||||||-||*|||||||||||||
targets:76   UUAGUCCCUCCAUUUUAUUCCAUU   99

3.0 Sequence 4544 from Patent EP2074227 NA coding protein psRNATarget
LQ238549.1
ncRNA:23   AAUCAGG-AGAUAAAAUAAGGUAA   1
  |||||||-||*|||||||||||||
targets:76   UUAGUCCCUCCAUUUUAUUCCAUU   99

3.0 Sequence 4544 from Patent EP2985353 NA coding protein psRNATarget