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BaseInfo

ncRNA ID novel_zma_miR14753
Species Zea mays
Class miRNA
Genome position Chr8:175534674-175534752 [+]
Reference genome RefGen_v4
Source SRR2089704
Length 22
Mature sequence(if miRNA) 58 - UGGUACUAUGUGGGAGCGUUGC - 79
Stem-loop(if miRNA) --   C    UU      -     - G --    UU   CUC
  AAC CUUU  UAUAGU UCACU C G  UCGC  GUC   U
  ||| ||||  |||||| ||||| | |  ||||  |||
  UUG GAGG  GUAUCA GGUGA G U  AGUG  CAG   U
CG   C    GU      U     U G GG    -U   AUU
Stem-loop sequence AACCCUUUUUUAUAGUUCACUCGGUCGCUUGUCCUCUUUUAGACUGUGAGGUGGUAGUGGUACUAUGUGGGAGCGUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008662044.2
ncRNA:22   CGUUGCGAGGGUGUAUCAUGGU   1
  |||=||||||||||||||||||
targets:3747   GCAGCGCUCCCACAUAGUACCA   3768

1.0 PREDICTED: Zea mays uncharacterized LOC103639282 (LOC103639282), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546483.1
ncRNA:22   CGUUGCGAGGGUGUAUCAUGGU   1
  |||=||||||||||||||||||
targets:3747   GCAGCGCUCCCACAUAGUACCA   3768

1.0 PREDICTED: Zea mays uncharacterized LOC103639282 (LOC103639282), transcript variant X1, mRNA NA coding protein psRNATarget