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BaseInfo

ncRNA ID	novel_zma_miR14713
Species	Zea mays
Class	miRNA
Genome position	Chr4:150388767-150388901 [+]
Reference genome	RefGen_v4
Source	SRR2089704
Length	24
Mature sequence(if miRNA)	1 - AACCAUAUGAUGUUGAUCCAAGGG - 24
Stem-loop(if miRNA)	--AAC               C      -          AG GAAAGGGGAUAUUUGCAAAAGUAUGAU      CAUAUGAUGUUGAUC AAGGGA CGUGCGGGGG  U                           U      ||||||||||||||| |||||| ||||||||||  |                           A      GUGUACUACAACUAG UUCCCU GCGCGCCCUC  C                           G GAAGA               A      U          -A CUAUUAAAACGUGAAUUGUCGGCCGAG
Stem-loop sequence	AACCAUAUGAUGUUGAUCCAAGGGACGUGCGGGGGAGUGAAAGGGGAUAUUUGCAAAAGUAUGAUUAGGAGCCGGCUGUUAAGUGCAAAAUUAUCCACUCCCGCGCGUUCCCUUAGAUCAACAUCAUGUGAGAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008676928.2	ncRNA:24   GGGAACCUAGUUGUAGUAUACCAA   1   |||||||||||||||||||||||| targets:2938   CCCUUGGAUCAACAUCAUAUGGUU   2961 Target Full Sequence	0.0	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At3g09650, chloroplastic (LOC103651307), mRNA	NA	coding protein	psRNATarget
LQ235050.1	ncRNA:24   GGGAACCUAGUUGUAGUAUACCAA   1   ||||||||||||||||||=||||| targets:125   CCCUUGGAUCAACAUCAUGUGGUU   148 Target Full Sequence	1.5	Sequence 1045 from Patent EP2985353	NA	coding protein	psRNATarget
HI402920.1	ncRNA:24   GGGAACCUAGUUGUAGUAUACCAA   1   ||||||||||||||||||=||||| targets:125   CCCUUGGAUCAACAUCAUGUGGUU   148 Target Full Sequence	1.5	Sequence 1045 from Patent EP2074227	NA	coding protein	psRNATarget
JB163381.1	ncRNA:24   GGGAACCUAGUUGUAGUAUACCAA   1   ||||||||||||||||||=||||| targets:125   CCCUUGGAUCAACAUCAUGUGGUU   148 Target Full Sequence	1.5	Sequence 1045 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008672781.2	ncRNA:24   GGGAACCUAGUUGUAGUAUACCAA   1   *****||||||*|||||||||||| targets:3245   GGGAAGGAUCAUCAUCAUAUGGUU   3268 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103648290), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008672779.2	ncRNA:24   GGGAACCUAGUUGUAGUAUACCAA   1   *****||||||*|||||||||||| targets:3247   GGGAAGGAUCAUCAUCAUAUGGUU   3270 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103648290), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008672778.2	ncRNA:24   GGGAACCUAGUUGUAGUAUACCAA   1   *****||||||*|||||||||||| targets:3231   GGGAAGGAUCAUCAUCAUAUGGUU   3254 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103648290), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008672777.2	ncRNA:24   GGGAACCUAGUUGUAGUAUACCAA   1   *****||||||*|||||||||||| targets:3248   GGGAAGGAUCAUCAUCAUAUGGUU   3271 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103648290), transcript variant X1, mRNA	NA	coding protein	psRNATarget