Search result

BaseInfo

ncRNA ID	novel_zma_miR14710
Species	Zea mays
Class	miRNA
Genome position	Chr2:127006110-127006200 [+]
Reference genome	RefGen_v4
Source	SRR1583942
Length	21
Mature sequence(if miRNA)	1 - ACACUAAUUUCCAAUGGGAUU - 21
Stem-loop(if miRNA)	--                                        UUA   ACACUAAUUUCCAAUGGGAUUUUCAUUUUUCCAAGGGAAA   G   ||||||||||||||||||||||||||||||||||||||||   U   UGUGAUUAAAGGUUACCCUAAAAGUAAAAGGGUUCCCUUU   U CU                                        UAC
Stem-loop sequence	ACACUAAUUUCCAAUGGGAUUUUCAUUUUUCCAAGGGAAAUUAGUUCAUUUUCCCUUGGGAAAAUGAAAAUCCCAUUGGAAAUUAGUGUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020544941.1	ncRNA:21   UUAGGGUAACCUUUAAUCACA   1   ||||||||*|||||||||||| targets:1632   AAUCCCAUGGGAAAUUAGUGU   1652 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020544939.1	ncRNA:21   UUAGGGUAACCUUUAAUCACA   1   ||||||||*|||||||||||| targets:1546   AAUCCCAUGGGAAAUUAGUGU   1566 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544940.1	ncRNA:21   UUAGGGUAACCUUUAAUCACA   1   ||||||||*|||||||||||| targets:1503   AAUCCCAUGGGAAAUUAGUGU   1523 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020544942.1	ncRNA:21   UUAGGGUAACCUUUAAUCACA   1   ||||||||*|||||||||||| targets:1502   AAUCCCAUGGGAAAUUAGUGU   1522 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020544943.1	ncRNA:21   UUAGGGUAACCUUUAAUCACA   1   ||||||||*|||||||||||| targets:1459   AAUCCCAUGGGAAAUUAGUGU   1479 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008675357.2	ncRNA:21   UUAGGGUAACCUUUAAUCACA   1   |||||=||*|||||||||||| targets:193   AAUCCUAUGGGAAAUUAGUGU   213 Target Full Sequence	2.5	PREDICTED: Zea mays UNE1 (LOC103649618), mRNA	NA	coding protein	psRNATarget