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BaseInfo

ncRNA ID novel_zma_miR14706
Species Zea mays
Class miRNA
Genome position Chr4:25673554-25673775 [+]
Reference genome RefGen_v4
Source SRR2089704
Length 24
Mature sequence(if miRNA) 199 - AUCAAUUUUCACUGGCGGUUUCUU - 222
Stem-loop(if miRNA) --A                CCA                                                                U  AACACC               U
   AAACCGCCAGUGGAAA   AUUUCCACUGGCGGUUGUCUUAACGCAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUG GU      AACCGCCAGUGAAAA U
   ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      |||||||||||||||
   UUUGGCGGUCACUUUU   UAAAGGUGACCGCCAACAGAAUUGCGUUGGCGGUCACCUUUAUCCUACAAAGGUGACCGCCAAU CA      UUGGCGGUCACUUUU G
UUC                AAC                                                                U  AUUCUA               A
Stem-loop sequence AAAACCGCCAGUGGAAACCAAUUUCCACUGGCGGUUGUCUUAACGCAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUGUGUAACACCAACCGCCAGUGAAAAUUGAUUUUCACUGGCGGUUAUCUUAACUUAACCGCCAGUGGAAACAUCCUAUUUCCACUGGCGGUUGCGUUAAGACAACCGCCAGUGGAAAUCAAUUUUCACUGGCGGUUUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001150001.1
ncRNA:24   UUCUUUGGCGGUCACUUUUAACUA   1
  |**|||||||||||||||||*|||
targets:660   AUAAAACCGCCAGUGAAAAUCGAU   683

1.5 Zea mays uncharacterized LOC100276144 (LOC100276144), mRNA NA coding protein psRNATarget
EU960305.1
ncRNA:24   UUCUUUGGCGGUCACUUUUAACUA   1
  |**|||||||||||||||||*|||
targets:660   AUAAAACCGCCAGUGAAAAUCGAU   683

1.5 Zea mays clone 223391 hypothetical protein mRNA, complete cds NA coding protein psRNATarget