ncRNA ID | novel_zma_miR14706 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:25673554-25673775 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089704 |
Length | 24 |
Mature sequence(if miRNA) | 199 - AUCAAUUUUCACUGGCGGUUUCUU - 222 |
Stem-loop(if miRNA) |
--A                CCA                                                                U  AACACC               U    AAACCGCCAGUGGAAA   AUUUCCACUGGCGGUUGUCUUAACGCAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUG GU      AACCGCCAGUGAAAA U    ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      |||||||||||||||    UUUGGCGGUCACUUUU   UAAAGGUGACCGCCAACAGAAUUGCGUUGGCGGUCACCUUUAUCCUACAAAGGUGACCGCCAAU CA      UUGGCGGUCACUUUU G UUC                AAC                                                                U  AUUCUA               A |
Stem-loop sequence | AAAACCGCCAGUGGAAACCAAUUUCCACUGGCGGUUGUCUUAACGCAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUGUGUAACACCAACCGCCAGUGAAAAUUGAUUUUCACUGGCGGUUAUCUUAACUUAACCGCCAGUGGAAACAUCCUAUUUCCACUGGCGGUUGCGUUAAGACAACCGCCAGUGGAAAUCAAUUUUCACUGGCGGUUUCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001150001.1 |
|
1.5 | Zea mays uncharacterized LOC100276144 (LOC100276144), mRNA | NA | coding protein | psRNATarget | |||||||||
EU960305.1 |
|
1.5 | Zea mays clone 223391 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |