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BaseInfo

ncRNA ID osa-miRf11065-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UACUACUGCUGGUGGUGGCGGCG - NA
Stem-loop(if miRNA)     -C           --                   UACUACUGCU   -  UA
UAGU  UACUACUGCUG  GUGGUGGCGGCGGCGGCGC          GCU GC  C
||||  |||||||||||  |||||||||||||||||||          ||| ||  U
AUCA  AUGAUGACGAC  CAUCAUCGUCGUCGUCGCG          CGA CG  A
    UC           AU                   ----------   U  UC
Stem-loop sequence UAGUCUACUACUGCUGGUGGUGGCGGCGGCGGCGCUACUACUGCUGCUGCUACUACUGCUAGCGCGCUGCUGCUGCUACUACUACAGCAGUAGUACUACUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KC954610.1
ncRNA:23   GCGGCGGUGGUGGUCGUCAUCAU   1
  =|==||||||||||*||||||||
targets:242   UGUUGCCACCACCACCAGUAGUA   264

1.5 Oryza sativa Japonica Group cultivar Dongjin WRKY2 mRNA, complete cds NA coding protein psRNATarget
XM_015758273.1
ncRNA:23   GCGGCGGUGGUGGUCGUCAUCAU   1
  =|==||||||||||*|||||||=
targets:798   UGUUGCCACCACCACCAGUAGUG   820

2.5 PREDICTED: Oryza sativa Japonica Group protein WRKY1 (LOC4349514), transcript variant X2, mRNA protein WRKY1(LOC4349514) coding protein psRNATarget
XM_015758272.1
ncRNA:23   GCGGCGGUGGUGGUCGUCAUCAU   1
  =|==||||||||||*|||||||=
targets:796   UGUUGCCACCACCACCAGUAGUG   818

2.5 PREDICTED: Oryza sativa Japonica Group protein WRKY1 (LOC4349514), transcript variant X1, mRNA protein WRKY1(LOC4349514) coding protein psRNATarget
AK106858.1
ncRNA:23   GCGGCGGUGGUGGUCGUCAUCAU   1
  =|==||||||||||*|||||||=
targets:1227   UGUUGCCACCACCACCAGUAGUG   1249

2.5 Oryza sativa Japonica Group cDNA clone:002-118-B12, full insert sequence NA coding protein psRNATarget