ncRNA ID | novel_zma_miR14672 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:4381179-4381252 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089703 |
Length | 24 |
Mature sequence(if miRNA) | 51 - GGGGAGAAGUUGGCUGAGAAGAAU - 74 |
Stem-loop(if miRNA) |
--      G - G          G --AA    -GC  G   UUUUCU A U AGCUUUUUCU A    AGCU   CU U   |||||| | | |||||||||| |    ||||   ||   AGAAGA U G UUGAAGAGGG U    UCGA   GA G UA      G C G          G GUGG    AAA  G |
Stem-loop sequence | UUUUCUGAUGAGCUUUUUCUGAAAAGCUGCCUGUGGAGAAAAGCUGGUGUGGGGAGAAGUUGGCUGAGAAGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001176816.1 |
|
2.5 | Zea mays Guanylate-binding family protein (LOC100384250), mRNA | NA | coding protein | psRNATarget | |||||||||
BT069588.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0169H22 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_008653547.2 |
|
2.5 | PREDICTED: Zea mays Guanylate-binding family protein (LOC100384250), transcript variant X1, mRNA | NA | coding protein | psRNATarget |