Search result

BaseInfo

ncRNA ID novel_zma_miR14672
Species Zea mays
Class miRNA
Genome position Chr2:4381179-4381252 [+]
Reference genome RefGen_v4
Source SRR2089703
Length 24
Mature sequence(if miRNA) 51 - GGGGAGAAGUUGGCUGAGAAGAAU - 74
Stem-loop(if miRNA) --      G - G          G --AA    -GC  G
  UUUUCU A U AGCUUUUUCU A    AGCU   CU U
  |||||| | | |||||||||| |    ||||   ||
  AGAAGA U G UUGAAGAGGG U    UCGA   GA G
UA      G C G          G GUGG    AAA  G
Stem-loop sequence UUUUCUGAUGAGCUUUUUCUGAAAAGCUGCCUGUGGAGAAAAGCUGGUGUGGGGAGAAGUUGGCUGAGAAGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001176816.1
ncRNA:24   UAAGAAGAGUCGGUUGAAGAGGGG   1
  *|||||||||*||||||||||=||
targets:282   UUUCUUCUCAACCAACUUCUCUCC   305

2.5 Zea mays Guanylate-binding family protein (LOC100384250), mRNA NA coding protein psRNATarget
BT069588.1
ncRNA:24   UAAGAAGAGUCGGUUGAAGAGGGG   1
  *|||||||||*||||||||||=||
targets:282   UUUCUUCUCAACCAACUUCUCUCC   305

2.5 Zea mays full-length cDNA clone ZM_BFb0169H22 mRNA, complete cds NA coding protein psRNATarget
XM_008653547.2
ncRNA:24   UAAGAAGAGUCGGUUGAAGAGGGG   1
  *|||||||||*||||||||||=||
targets:548   UUUCUUCUCAACCAACUUCUCUCC   571

2.5 PREDICTED: Zea mays Guanylate-binding family protein (LOC100384250), transcript variant X1, mRNA NA coding protein psRNATarget