Search result

BaseInfo

ncRNA ID	novel_zma_miR14667
Species	Zea mays
Class	miRNA
Genome position	Chr10:22309030-22309115 [-]
Reference genome	RefGen_v4
Source	SRR2089703
Length	24
Mature sequence(if miRNA)	1 - AAAAGUACUCGGCAAAGACGGUUU - 24
Stem-loop(if miRNA)	--    CUUU              ----    UA            C   GCUG    UCUUUGUCGAGUGC    UCUC  GCACUCGGCAAA C   ||||    ||||||||||||||    ||||  ||||||||||||   UGGC    AGAAACGGCUCAUG    AGAG  CGUGGGCCGUUU A UU    ----              AAAA    CC            C
Stem-loop sequence	GCUGCUUUUCUUUGUCGAGUGCUCUCUAGCACUCGGCAAACCACUUUGCCGGGUGCCCGAGAAAAAGUACUCGGCAAAGACGGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167714.1	ncRNA:24   UUUGGCAGAAACGGCUCAUGAAAA   1   ||=||*|||||||||||||||||| targets:29   AAGCCUUCUUUGCCGAGUACUUUU   52 Target Full Sequence	1.0	Sequence 5378 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239383.1	ncRNA:24   UUUGGCAGAAACGGCUCAUGAAAA   1   ||=||*|||||||||||||||||| targets:29   AAGCCUUCUUUGCCGAGUACUUUU   52 Target Full Sequence	1.0	Sequence 5378 from Patent EP2985353	NA	coding protein	psRNATarget
HI407253.1	ncRNA:24   UUUGGCAGAAACGGCUCAUGAAAA   1   ||=||*|||||||||||||||||| targets:29   AAGCCUUCUUUGCCGAGUACUUUU   52 Target Full Sequence	1.0	Sequence 5378 from Patent EP2074227	NA	coding protein	psRNATarget
EU974507.1	ncRNA:24   UUUGGC--AGAAACGGCUCAUGAAAA   1   *|||*|--|||||||||||||||||| targets:440   UAACAGCUUCUUUGCCGAGUACUUUU   465 Target Full Sequence	2.5	Zea mays clone 451014 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget