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BaseInfo

ncRNA ID	novel_zma_miR14664
Species	Zea mays
Class	miRNA
Genome position	Chr2:6549436-6549566 [-]
Reference genome	RefGen_v4
Source	SRR1583942
Length	24
Mature sequence(if miRNA)	108 - GUCUUAGAUCUAACGUCUCUAGUU - 131
Stem-loop(if miRNA)	---                  C      U UG     U     UAAG      C    A  UG  G    GUCUUAGAUCUAACGUCU UAGUUG U  UUAUA UUUGC    GACACC UCCA CG  AU G    |||||||||||||||||| |||||| |  ||||| |||||    |||||| |||| ||  ||    UAGAAUCUAGAUUGCAGA AUCAAC A  AGUGU AAAUG    UUGUGG AGGU GU  UG G AGU                  U      U GU     U     UUUA      A    G  GA  U
Stem-loop sequence	GUCUUAGAUCUAACGUCUCUAGUUGUUUGUUAUAUUUUGCUAAGGACACCCUCCAACGUGAUGGGUGUAGUGGUGGAAGGUGUUAUUUGUAAAUUGUGAUGAUCAACUAUAGACGUUAGAUCUAAGAUUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163844.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   |||||||||||||||||||||*|= targets:124   AACUAGAGACGUUAGAUCUAAAAU   147 Target Full Sequence	2.5	Sequence 1508 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235513.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   |||||||||||||||||||||*|= targets:124   AACUAGAGACGUUAGAUCUAAAAU   147 Target Full Sequence	2.5	Sequence 1508 from Patent EP2985353	NA	coding protein	psRNATarget
HI403383.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   |||||||||||||||||||||*|= targets:124   AACUAGAGACGUUAGAUCUAAAAU   147 Target Full Sequence	2.5	Sequence 1508 from Patent EP2074227	NA	coding protein	psRNATarget
JB163735.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   |||||||||||||||||||||*|= targets:125   AACUAGAGACGUUAGAUCUAAAAU   148 Target Full Sequence	2.5	Sequence 1399 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235404.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   |||||||||||||||||||||*|= targets:125   AACUAGAGACGUUAGAUCUAAAAU   148 Target Full Sequence	2.5	Sequence 1399 from Patent EP2985353	NA	coding protein	psRNATarget
HI403274.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   |||||||||||||||||||||*|= targets:125   AACUAGAGACGUUAGAUCUAAAAU   148 Target Full Sequence	2.5	Sequence 1399 from Patent EP2074227	NA	coding protein	psRNATarget
XM_008646350.2	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   |||||||||||||||||||||*|= targets:1719   AACUAGAGACGUUAGAUCUAAAAU   1742 Target Full Sequence	2.5	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC103625944), mRNA	NA	coding protein	psRNATarget
XM_020552764.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   |||||||||||||||||||||*|= targets:3070   AACUAGAGACGUUAGAUCUAAAAU   3093 Target Full Sequence	2.5	PREDICTED: Zea mays probable serine/threonine-protein kinase WNK8 (LOC103654279), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008681116.2	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   |||||||||||||||||||||*|= targets:3248   AACUAGAGACGUUAGAUCUAAAAU   3271 Target Full Sequence	2.5	PREDICTED: Zea mays probable serine/threonine-protein kinase WNK8 (LOC103654279), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ092927.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   |||*|||||||||||||||=|||= targets:82   AACCAGAGACGUUAGAUCUGAGAU   105 Target Full Sequence	2.5	TSA: Zea mays contig28576, mRNA sequence	NA	coding protein	psRNATarget
JB163685.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   ||=||||||||||||||||||*|= targets:124   AAUUAGAGACGUUAGAUCUAAAAU   147 Target Full Sequence	2.5	Sequence 1349 from Patent EP2559767	NA	coding protein	psRNATarget
HI403224.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   ||=||||||||||||||||||*|= targets:124   AAUUAGAGACGUUAGAUCUAAAAU   147 Target Full Sequence	2.5	Sequence 1349 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235354.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   ||=||||||||||||||||||*|= targets:124   AAUUAGAGACGUUAGAUCUAAAAU   147 Target Full Sequence	2.5	Sequence 1349 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235548.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   ||=*|||||||||||||||||*|= targets:136   AAUCAGAGACGUUAGAUCUAAAAU   159 Target Full Sequence	2.5	Sequence 1543 from Patent EP2985353	NA	coding protein	psRNATarget
JB163879.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   ||=*|||||||||||||||||*|= targets:136   AAUCAGAGACGUUAGAUCUAAAAU   159 Target Full Sequence	2.5	Sequence 1543 from Patent EP2559767	NA	coding protein	psRNATarget
HI403418.1	ncRNA:24   UUGAUCUCUGCAAUCUAGAUUCUG   1   ||=*|||||||||||||||||*|= targets:136   AAUCAGAGACGUUAGAUCUAAAAU   159 Target Full Sequence	2.5	Sequence 1543 from Patent EP2074227	NA	coding protein	psRNATarget