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BaseInfo

ncRNA ID	novel_zma_miR14657
Species	Zea mays
Class	miRNA
Genome position	Chr2:213302444-213302495 [+]
Reference genome	RefGen_v4
Source	SRR2089703
Length	24
Mature sequence(if miRNA)	1 - AGGGGUAACGGUUGCGGAUAGUCU - 24
Stem-loop(if miRNA)	--      -   G       A        AGGGGU AAC GUUGCGG UAGUCU   |||||| ||| ||||||| |||||A   UUCUCA UUG CAACGUU GUCAGA GG      C   G       G
Stem-loop sequence	AGGGGUAACGGUUGCGGAUAGUCUAAGACUGGUUGCAACGGUUCACUCUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008655108.2	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   ||=||||||||||||||||||||| targets:1480   AGGCUAUCCGCAACCGUUACCCCU   1503 Target Full Sequence	0.0	PREDICTED: Zea mays putative methylesterase 11, chloroplastic (LOC103633404), mRNA	NA	coding protein	psRNATarget
BT063389.1	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   ||=||||||||||||||||||||| targets:1663   AGGCUAUCCGCAACCGUUACCCCU   1686 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0059C06 mRNA, complete cds	NA	coding protein	psRNATarget
EU953688.1	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   ||=||||||||||||||||=|||| targets:852   AGGCUAUCCGCAACCGUUAUCCCU   875 Target Full Sequence	1.5	Zea mays clone 1444098 glucan endo-1,3-beta-glucosidase 3 precursor, mRNA, complete cds	NA	coding protein	psRNATarget
XM_008646273.2	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   ||=||||||||||||||||=|||| targets:1005   AGGCUAUCCGCAACCGUUAUCCCU   1028 Target Full Sequence	1.5	PREDICTED: Zea mays PLASMODESMATA CALLOSE-BINDING PROTEIN 3 (LOC103625874), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020537866.1	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   ||=||||||||||||||||=|||| targets:1167   AGGCUAUCCGCAACCGUUAUCCCU   1190 Target Full Sequence	1.5	PREDICTED: Zea mays PLASMODESMATA CALLOSE-BINDING PROTEIN 3 (LOC103625874), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001152551.1	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   ||=|||||=||||||||||||||| targets:719   AGGCUAUCUGCAACCGUUACCCCU   742 Target Full Sequence	1.0	Zea mays uncharacterized LOC100279554 (LOC100279554), mRNA	NA	coding protein	psRNATarget
BT054443.2	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   ||=|||||=||||||||||||||| targets:719   AGGCUAUCUGCAACCGUUACCCCU   742 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0062K05 mRNA, complete cds	NA	coding protein	psRNATarget
EU950284.1	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   ||=|||||||=||||||||||=|| targets:800   AGGCUAUCCGUAACCGUUACCUCU   823 Target Full Sequence	2.5	Zea mays clone 485395 mRNA sequence	NA	coding protein	psRNATarget
XM_008646613.2	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   |||||||||||||*|||||||||| targets:1232   AGACUAUCCGCAAGCGUUACCCCU   1255 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103626209 (LOC103626209), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008653573.2	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   ||*||||||||||||||||||||| targets:2199   AGUCUAUCCGCAACCGUUACCCCU   2222 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100501319 (LOC100501319), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020547641.1	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   ||||||||||||||||||*||||| targets:3644   AGACUAUCCGCAACCGUUCCCCCU   3667 Target Full Sequence	1.5	PREDICTED: Zea mays U11/U12 small nuclear ribonucleoprotein 48 kDa protein (LOC100279189), transcript variant X2, mRNA	NA	coding protein	psRNATarget
NM_001143420.1	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   ||=||||||||||||||||||*|| targets:1238   AGGCUAUCCGCAACCGUUACCACU   1261 Target Full Sequence	1.5	Zea mays putative HLH DNA-binding domain superfamily protein (bHLH20), mRNA	NA	coding protein	psRNATarget
BT037825.1	ncRNA:24   UCUGAUAGGCGUUGGCAAUGGGGA   1   ||=||||||||||||||||||*|| targets:1238   AGGCUAUCCGCAACCGUUACCACU   1261 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0198D08 mRNA, complete cds	NA	coding protein	psRNATarget