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BaseInfo

ncRNA ID	osa-miRf11062-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - UUCUUGAGGAGGUAACAUGAGGUAC - NA
Stem-loop(if miRNA)	A            CUUUUUCUAU      -          --A      G AAUUUUACGGUUCUUGAGGAGGUA CAUGAGGUACCA          UGUAAA UUUGGUACUU   GGUACU U |||||||||||||||||||||||| ||||||||||||          |||||| ||||||||||   |||||| UUAAGAUGCCAGGAACUCCUCCAU GUACUCCAUGGU          ACAUUU AAACCAUGGA   CCAUGG G                         G            -UUUUAAAUU      U          GUA      A
Stem-loop sequence	AAUUUUACGGUUCUUGAGGAGGUAACAUGAGGUACCACUUUUUCUAUUGUAAAUUUGGUACUUAGGUACUGUGAGGUACCAUGAGGUACCAAAUUUUACAUUAAAUUUUUGGUACCUCAUGGUACCUCCUCAAGGACCGUAGAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK065584.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   ||||||||||*|||||||||||||| targets:1457   GUACCUCAUGGUACCUCCUCAAGAA   1481 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J013033A03, full insert sequence	NA	coding protein	psRNATarget
AK120403.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   ||||||||||*|||||||||||||| targets:1553   GUACCUCAUGGUACCUCCUCAAGAA   1577 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J013088K21, full insert sequence	NA	coding protein	psRNATarget
XM_015782130.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   ||||||||||*|||||||||||||| targets:1917   GUACCUCAUGGUACCUCCUCAAGAA   1941 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group leucine--tRNA ligase, cytoplasmic (LOC9272228), mRNA	leucine--tRNA ligase, cytoplasmic(LOC9272228)	coding protein	psRNATarget
AK105471.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   |||=||||||*|||||||||||||| targets:1350   GUAUCUCAUGGUACCUCCUCAAGAA   1374 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:001-127-A01, full insert sequence	NA	coding protein	psRNATarget
XM_015765620.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   |||=||||||*|||||||||||||| targets:1358   GUAUCUCAUGGUACCUCCUCAAGAA   1382 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (LOC4324919), transcript variant X1, mRNA	probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(LOC4324919)	coding protein	psRNATarget
XM_015765621.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   |||=||||||*|||||||||||||| targets:1376   GUAUCUCAUGGUACCUCCUCAAGAA   1400 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (LOC4324919), transcript variant X3, mRNA	probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(LOC4324919)	coding protein	psRNATarget
AK242475.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   ||||||||||*||||||||||||=| targets:1303   GUACCUCAUGGUACCUCCUCAAGGA   1327 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J080303E02, full insert sequence	NA	coding protein	psRNATarget
AK119399.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   ||||||||||*||||||||||||=| targets:643   GUACCUCAUGGUACCUCCUCAAGGA   667 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-132-D12, full insert sequence	NA	coding protein	psRNATarget
XM_015777564.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   ||||||||||*||||||||||||=| targets:653   GUACCUCAUGGUACCUCCUCAAGGA   677 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group B3 domain-containing protein Os03g0619600 (LOC4333464), transcript variant X2, mRNA	B3 domain-containing protein Os03g0619600(LOC4333464)	coding protein	psRNATarget
XM_015777563.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   ||||||||||*||||||||||||=| targets:653   GUACCUCAUGGUACCUCCUCAAGGA   677 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group B3 domain-containing protein Os03g0619600 (LOC4333464), transcript variant X1, mRNA	B3 domain-containing protein Os03g0619600(LOC4333464)	coding protein	psRNATarget
AK111557.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   *|==*|||||*|||||||||=|||| targets:836   AUGUGUCAUGGUACCUCCUCGAGAA   860 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013057F02, full insert sequence	NA	coding protein	psRNATarget
XM_015791517.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   *|==*|||||*|||||||||=|||| targets:900   AUGUGUCAUGGUACCUCCUCGAGAA   924 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group histone deacetylase 15 (LOC4342472), mRNA	histone deacetylase 15(LOC4342472)	coding protein	psRNATarget
AK110126.1	ncRNA:25   CAUGGAGUACAAUGGAGGAGUUCUU   1   *||||*|||*||*|||||||||||| targets:561   CUACCACAUCUUCCCUCCUCAAGAA   585 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-161-C01, full insert sequence	NA	coding protein	psRNATarget