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BaseInfo

ncRNA ID	novel_zma_miR14630
Species	Zea mays
Class	miRNA
Genome position	Chr9:43543235-43543433 [+]
Reference genome	RefGen_v4
Source	SRR2089703
Length	24
Mature sequence(if miRNA)	1 - UGAAAAUGGAUUUCCACUGGCGGU - 24
Stem-loop(if miRNA)	---U    AUGG                     -UAAA                                     AA    AGAU             AAU     GAAA    AUUUCCACUGGCGGUUGUCUU     AACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUU  GUUA    AACCGCCAGUGGA   C     ||||    |||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||  ||||    |||||||||||||     CUUU    UAAAGGUGACCGCCAAUAGAA     UUGGCGGUCACCUUUAUCCUACAAAGGUGACCGCCAA  CAAU    UUGGCGGUCACUU   A UCAC    -GGA                     UUGUG                                     CA    GUGU             GUA
Stem-loop sequence	UGAAAAUGGAUUUCCACUGGCGGUUGUCUUUAAAAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUAAGUUAAGAUAACCGCCAGUGGAAAUCAAUGUUCACUGGCGGUUUGUGUAACACAACCGCCAGUGGAAACAUCCUAUUUCCACUGGCGGUUGUGUUAAGAUAACCGCCAGUGGAAAUAGGUUUCCACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT069194.2	ncRNA:24   UGGCGGUCACCUUUAGGUAAAAGU   1   |||||||||||||||*|||||||| targets:855   ACCGCCAGUGGAAAUGCAUUUUCA   878 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0304H22 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176701.1	ncRNA:24   UGGCGGUCACCUUUAGGUAAAAGU   1   |||||||||||||||*|||||||| targets:855   ACCGCCAGUGGAAAUGCAUUUUCA   878 Target Full Sequence	1.5	Zea mays uncharacterized LOC100384113 (LOC100384113), mRNA	NA	coding protein	psRNATarget
EU960305.1	ncRNA:24   UGGCGGUCACCUUUAGGUAAAAGU   1   ||||||||||*|||||*||||||| targets:621   ACCGCCAGUGAAAAUCAAUUUUCA   644 Target Full Sequence	2.5	Zea mays clone 223391 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU960305.1	ncRNA:24   UGGCGGUCACCUUUAGGUAAAAGU   1   ||||||||||*|||||*||||||| targets:665   ACCGCCAGUGAAAAUCGAUUUUCA   688 Target Full Sequence	2.5	Zea mays clone 223391 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001150001.1	ncRNA:24   UGGCGGUCACCUUUAGGUAAAAGU   1   ||||||||||*|||||*||||||| targets:621   ACCGCCAGUGAAAAUCAAUUUUCA   644 Target Full Sequence	2.5	Zea mays uncharacterized LOC100276144 (LOC100276144), mRNA	NA	coding protein	psRNATarget
NM_001150001.1	ncRNA:24   UGGCGGUCACCUUUAGGUAAAAGU   1   ||||||||||*|||||*||||||| targets:665   ACCGCCAGUGAAAAUCGAUUUUCA   688 Target Full Sequence	2.5	Zea mays uncharacterized LOC100276144 (LOC100276144), mRNA	NA	coding protein	psRNATarget
EU944461.1	ncRNA:24   UGGCGGUCACCUUUAGGUAAAAGU   1   ||||||||||*|||||*||||||| targets:862   ACCGCCAGUGAAAAUCGAUUUUCA   885 Target Full Sequence	2.5	Zea mays clone 219441 mRNA sequence	NA	coding protein	psRNATarget