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BaseInfo

ncRNA ID	ath-miRf10154-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - UAUUCGACCAGGGGGUCGAGUGG - NA
Stem-loop(if miRNA)	A         AGGG         --    G  AGA UG -A     GA GUGAUG UACUCGACC    GGUCGAGUA  ACUU GU   G  A  UGGCU  G |||||| |||||||||    |||||||||  |||| ||   |  |  ||||| UACUGC GUGAGCUGG    CCAGCUUAU  UGAA CG   U  U  ACUGG  U       G         GGGA         AG    G  GUG GU GG     UG
Stem-loop sequence	GUGAUGAUACUCGACCAGGGGGUCGAGUAACUUGGUAGAGUGAAUGGCUGAGUGUGGUCAGGUUGUGUGGCGAAGUGAUAUUCGACCAGGGGGUCGAGUGGCGUCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069808.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   ||||||||||||||||||||=|| targets:90   CCACUCGACCCCCUGGUCGAGUA   112 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   ||||||||||||||||||||=|| targets:230   CCACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   |=||||||||||||||||||=|| targets:181   CUACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   ||||||||||||||||||||=|| targets:230   CCACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   |=||||||||||||||||||=|| targets:181   CUACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   ||||||||||||||||||||=|| targets:124   CCACUCGACCCCCUGGUCGAGUA   146 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   ||||||||||||||||||||=|| targets:499   CCACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   ||||||||||||||||||||=|| targets:499   CCACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   =|||||||||||||||||||=|| targets:1571   UCACUCGACCCCCUGGUCGAGUA   1593 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   ==||||||||||||||||||=|| targets:308   UUACUCGACCCCCUGGUCGAGUA   330 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   ==||||*|||||||||||||=|| targets:301   UUACUCAACCCCCUGGUCGAGUA   323 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   ==||||*|||||||||||||=|| targets:301   UUACUCAACCCCCUGGUCGAGUA   323 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GGUGAGCUGGGGGACCAGCUUAU   1   ==||*|||||||||||||||=|| targets:583   UUACYCGACCCCCUGGUCGAGUA   605 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget