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BaseInfo

ncRNA ID	novel_zma_miR14624
Species	Zea mays
Class	miRNA
Genome position	Chr3:138937793-138937858 [-]
Reference genome	RefGen_v4
Source	SRR1583941
Length	22
Mature sequence(if miRNA)	1 - CACCUUCUCCGUCAGCUUGCGG - 22
Stem-loop(if miRNA)	--  C        CC      CA   CUCU   CC   GC AGCUGGCG  GAAGGU  GUC    CGC  U   || ||||||||  ||||||  |||    |||   CG UCGACUGC  CUUCCA  CGG    GCG  C GG  U        CU      -C   ---C   AC
Stem-loop sequence	GCCAGCUGGCGCCGAAGGUCAGUCCUCUCGCCCUCCAGCGCGGCCACCUUCUCCGUCAGCUUGCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020545377.1	ncRNA:22   GGCGUUCGACUGCCUCUUCCAC   1   |||||=|||||||||||||||| targets:522   CCGCAGGCUGACGGAGAAGGUG   543 Target Full Sequence	1.0	PREDICTED: Zea mays actin cytoskeleton-regulatory complex protein PAN1-like (LOC109942829), mRNA	NA	coding protein	psRNATarget
BT055126.1	ncRNA:22   GGCGUUCGACUGCCUCUUCCAC   1   ||||||||||=||||||||||| targets:877   CCGCAAGCUGGCGGAGAAGGUG   898 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0068E02 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020547267.1	ncRNA:22   GGCGUUCGACUGCCUCUUCCAC   1   ||||||||||=||||||||||| targets:889   CCGCAAGCUGGCGGAGAAGGUG   910 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109943773 (LOC109943773), mRNA	NA	coding protein	psRNATarget
XM_020544608.1	ncRNA:22   GGCGUUCGACUGCCUCUUCCAC   1   |||||*|||||=|||||||||| targets:429   CCGCAUGCUGAUGGAGAAGGUG   450 Target Full Sequence	2.5	PREDICTED: Zea mays brain acid soluble protein 1-like (LOC109942535), mRNA	NA	coding protein	psRNATarget
XM_020541535.1	ncRNA:22   GGCGUUCGACUGCCUCUUCCAC   1   =||||=||||*||||||||||| targets:192   UCGCAGGCUGUCGGAGAAGGUG   213 Target Full Sequence	2.5	PREDICTED: Zea mays brain acid soluble protein 1-like (LOC109941057), mRNA	NA	coding protein	psRNATarget
XM_008664619.2	ncRNA:22   GGCGUUCGACUGCCUCUUCCAC   1   |*|||||||||*|||||||||| targets:789   CAGCAAGCUGAGGGAGAAGGUG   810 Target Full Sequence	1.5	PREDICTED: Zea mays choline-phosphate cytidylyltransferase 2 (LOC103641255), mRNA	NA	coding protein	psRNATarget
XM_008681278.2	ncRNA:22   GGCGUUCGACUGCCUCUUCCAC   1   ||*|||||*|=||||||||||| targets:628   CCUCAAGCAGGCGGAGAAGGUG   649 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103654450 (LOC103654450), mRNA	NA	coding protein	psRNATarget