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BaseInfo

ncRNA ID	novel_zma_miR14619
Species	Zea mays
Class	miRNA
Genome position	Chr8:42255414-42255463 [-]
Reference genome	RefGen_v4
Source	SRR2089703;SRR2089706;SRR2089708
Length	24
Mature sequence(if miRNA)	1 - CCCAUGGGUUGGCGGGUAUCGGGU - 24
Stem-loop(if miRNA)	--  -        -AC     A       CC AUACUCGU   CCUAU GGGGA   || ||||||||   ||||| ||||A   GG UAUGGGCG   GGGUA CCCCU UG  C        GUU     -
Stem-loop sequence	CCAUACUCGUACCCUAUAGGGGAAUCCCCAUGGGUUGGCGGGUAUCGGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ241094.1	ncRNA:24   UGGGCUAUGGGCGGUUGGGUACCC   1   |||||||||||||||||||=|||| targets:9   ACCCGAUACCCGCCAACCCGUGGG   32 Target Full Sequence	1.5	Sequence 7089 from Patent EP2985353	NA	coding protein	psRNATarget
JB169425.1	ncRNA:24   UGGGCUAUGGGCGGUUGGGUACCC   1   |||||||||||||||||||=|||| targets:9   ACCCGAUACCCGCCAACCCGUGGG   32 Target Full Sequence	1.5	Sequence 7089 from Patent EP2559767	NA	coding protein	psRNATarget
HI408964.1	ncRNA:24   UGGGCUAUGGGCGGUUGGGUACCC   1   |||||||||||||||||||=|||| targets:9   ACCCGAUACCCGCCAACCCGUGGG   32 Target Full Sequence	1.5	Sequence 7089 from Patent EP2074227	NA	coding protein	psRNATarget
BT069629.1	ncRNA:24   UGGGCUAUGGGCGGUUGGGUACCC   1   |||||||||||||||||||=|||| targets:939   ACCCGAUACCCGCCAACCCGUGGG   962 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0188I06 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008658350.2	ncRNA:24   UGGGCUAUGGGCGGUUGGGUACCC   1   |||||||||||||||||||=|||| targets:953   ACCCGAUACCCGCCAACCCGUGGG   976 Target Full Sequence	1.5	PREDICTED: Zea mays NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 (LOC100275017), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020548181.1	ncRNA:24   UGGGCUAUGGGCGGUUGGGUACCC   1   |||||||||||||||||||=|||| targets:3157   ACCCGAUACCCGCCAACCCGUGGG   3180 Target Full Sequence	1.5	PREDICTED: Zea mays proline--tRNA ligase, cytoplasmic-like (LOC103648437), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020541949.1	ncRNA:24   UGGGCUAUGGGCGGUUGGGUACCC   1   ||||-||||||||*|||||||||| targets:2005   ACCC-AUACCCGCAAACCCAUGGG   2027 Target Full Sequence	1.5	PREDICTED: Zea mays Phosphoglycerate mutase-like protein AT74H (LOC100273186), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT061998.1	ncRNA:24   UGGGCUAUGGGCGGUUGGGUACCC   1   ||||-|||=||||*|||||||||| targets:788   ACCC-AUAUCCGCAAACCCAUGGG   810 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0205A11 mRNA, complete cds	NA	coding protein	psRNATarget