ncRNA ID | novel_zma_miR14615 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:89026834-89026930 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583942 |
Length | 21 |
Mature sequence(if miRNA) | 77 - UCGAAUAUUCUGUGUCCACUG - 97 |
Stem-loop(if miRNA) |
--   A    U -   G   A   GAAUG    AGUCU     G   U    A   UCG AUAU C UGU UCC CUG     GACA     GGUGU GUA GACA U   ||| |||| | ||| ||| |||     ||||     ||||| ||| |||| U   AGU UGUG G AUA AGG GAC     CUGU     CUACA CGU UUGU A UG   G    U U   A   -   ---AA    -----     A   U    G |
Stem-loop sequence | UCGAAUAUUCUGUGUCCACUGGAAUGGACAAGUCUGGUGUGGUAUGACAAUUAGUGUUUUGCAACAUCUGUCAACAGGGAAAUAUGUGUGUGUGAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY107700.1 |
|
2.5 | Zea mays PCO112312 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU962378.1 |
|
2.5 | Zea mays clone 242186 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT042432.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0231J09 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001148517.1 |
|
2.5 | Zea mays CMP-sialic acid transporter 1 (pco112312a), mRNA | NA | coding protein | psRNATarget |