Search result

BaseInfo

ncRNA ID	novel_zma_miR14603
Species	Zea mays
Class	miRNA
Genome position	Chr7:104007852-104007901 [-]
Reference genome	RefGen_v4
Source	SRR2089703
Length	22
Mature sequence(if miRNA)	1 - AAUCCAGCAGGGCGGUUGAGGA - 22
Stem-loop(if miRNA)	--  AU   -    U        AC   CU  ACC CCUU CUGGAUUG  C   ||  ||| |||| ||||||||  C   GA  UGG GGGA GACCUAAU  U AG  GU   C    C        AA
Stem-loop sequence	CUAUACCCCUUUCUGGAUUGACCCUAAUAAUCCAGCAGGGCGGUUGAGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008668648.1	ncRNA:22   AGGAGUUGGCGGGACGACCUAA   1   |||*|=|||||||||||||||* targets:205   UCCGCGACCGCCCUGCUGGAUC   226 Target Full Sequence	3.0	PREDICTED: Zea mays vegetative cell wall protein gp1-like (LOC103645627), mRNA	NA	coding protein	psRNATarget
EU964611.1	ncRNA:22   AGGAGUUGGCGGGACGACCUAA   1   **||||=||*|||||||||||| targets:177   AACUCAGCCCCCCUGCUGGAUU   198 Target Full Sequence	2.5	Zea mays clone 280334 ubiquitin-conjugating enzyme E2 W mRNA, complete cds	NA	coding protein	psRNATarget
EU961110.1	ncRNA:22   AGGAGUUGGCGGGACGACCUAA   1   **||||=||*|||||||||||| targets:123   AACUCAGCCCCCCUGCUGGAUU   144 Target Full Sequence	2.5	Zea mays clone 232776 ubiquitin-conjugating enzyme E2 W mRNA, complete cds	NA	coding protein	psRNATarget
BT038458.1	ncRNA:22   AGGAGUUGGCGGGACGACCUAA   1   **||||=||*|||||||||||| targets:197   AACUCAGCCCCCCUGCUGGAUU   218 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0274F06 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001146794.1	ncRNA:22   AGGAGUUGGCGGGACGACCUAA   1   **||||=||*|||||||||||| targets:197   AACUCAGCCCCCCUGCUGGAUU   218 Target Full Sequence	2.5	Zea mays ubiquitin conjugating enzyme 1 (LOC100272309), mRNA	NA	coding protein	psRNATarget
AY106904.1	ncRNA:22   AGGAGUUGGCGGGACGACCUAA   1   **||||=||*|||||||||||| targets:218   AACUCAGCCCCCCUGCUGGAUU   239 Target Full Sequence	2.5	Zea mays PCO132238 mRNA sequence	NA	coding protein	psRNATarget