Search result

BaseInfo

ncRNA ID	novel_zma_miR14599
Species	Zea mays
Class	miRNA
Genome position	Chr7:179283324-179283389 [+]
Reference genome	RefGen_v4
Source	SRR2089703
Length	24
Mature sequence(if miRNA)	43 - UCUAAUUAUGGGCUGUGCCGUGCC - 66
Stem-loop(if miRNA)	--          G    C  --   -CACG   CA   CACGGCACAG CCCA AA  AGG     GCC  C   |||||||||| |||| ||  |||     |||   GUGCCGUGUC GGGU UU  UCU     CGG  A CC          -    A  AA   AUACA   AA
Stem-loop sequence	CACGGCACAGGCCCACAAAGGCACGGCCCACAAAGGCACAUAUCUAAUUAUGGGCUGUGCCGUGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020547541.1	ncRNA:24   CCGUGCCGUGUCGGGUAUUAAUCU   1   ||||||||||=||||||||||||| targets:3389   GGCACGGCACGGCCCAUAAUUAGA   3412 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100273682 (LOC100273682), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT017151.1	ncRNA:24   CC-GUGCCGUGUCGGGUAUUAAUCU   1   ||-|==||*||=||||||||||||* targets:442   GGUCGUGGGACGGCCCAUAAUUAGC   466 Target Full Sequence	3.0	Zea mays clone EL01N0367C02.c mRNA sequence	NA	coding protein	psRNATarget
AY105789.1	ncRNA:24   CC-GUGCCGUGUCGGGUAUUAAUCU   1   ||-|==||*||=||||||||||||* targets:1049   GGUCGUGGGACGGCCCAUAAUUAGC   1073 Target Full Sequence	3.0	Zea mays PCO061627 mRNA sequence	NA	coding protein	psRNATarget