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BaseInfo

ncRNA ID novel_zma_miR14594
Species Zea mays
Class miRNA
Genome position Chr1:181909179-181909238 [+]
Reference genome RefGen_v4
Source SRR2089703
Length 24
Mature sequence(if miRNA) 37 - UGUCUUUAUGCUGUAGGAGAGGGU - 60
Stem-loop(if miRNA) -     - AC     UA            U
 UCCUC C  GCGGC  GGAGACGUCGCA G
 ||||| |  |||||  ||||||||||||
 GGGAG G  UGUCG  UUUCUGUAGCGU G
U     A GA     UA            G
Stem-loop sequence UCCUCCACGCGGCUAGGAGACGUCGCAUGGGUGCGAUGUCUUUAUGCUGUAGGAGAGGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT037691.1
ncRNA:24   UGGGAGAGGAUGUCGUAUUUCUGU   1
  |===*=||*|||||||||||||||
targets:628   AUUUAUUCGUACAGCAUAAAGACA   651

2.0 Zea mays full-length cDNA clone ZM_BFb0188D07 mRNA, complete cds NA coding protein psRNATarget
BT055218.1
ncRNA:24   UGGGAGAGGAUGUCGUAUUUCUGU   1
  |===*=||*|||||||||||||||
targets:1301   AUUUAUUCGUACAGCAUAAAGACA   1324

2.0 Zea mays full-length cDNA clone ZM_BFc0139C07 mRNA, complete cds NA coding protein psRNATarget
NM_001310020.1
ncRNA:24   UGGGAGAGGAUGUCGUAUUUCUGU   1
  |===*=||*|||||||||||||||
targets:1375   AUUUAUUCGUACAGCAUAAAGACA   1398

2.0 Zea mays Pectinesterase (cl3054_1), mRNA NA coding protein psRNATarget
EU967883.1
ncRNA:24   UGGGAGAGGAUGUCGUAUUUCUGU   1
  |===*=||*|||||||||||||||
targets:1430   AUUUAUUCGUACAGCAUAAAGACA   1453

2.0 Zea mays clone 306815 mRNA sequence NA coding protein psRNATarget