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BaseInfo

ncRNA ID novel_zma_miR14574
Species Zea mays
Class miRNA
Genome position Chr5:186718367-186718443 [+]
Reference genome RefGen_v4
Source SRR2089703
Length 24
Mature sequence(if miRNA) 54 - AAUGUACAAGGAGGGAUGGAAUGA - 77
Stem-loop(if miRNA) --C       A      A     --C         A ACU
   UUCCAUC UUUCUU UGUAU   CAACCAAAC C   U
   ||||||| |||||| |||||   ||||||||| |   A
   AAGGUAG GGAGGA ACAUG   GUUGGUUUG G   U
AGU       -      -     UAA         C AAU
Stem-loop sequence CUUCCAUCAUUUCUUAUGUAUCCAACCAAACACACUUAUUAAGCGUUUGGUUGAAUGUACAAGGAGGGAUGGAAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020548181.1
ncRNA:24   AGUAAGGUAGGGAGGAACAUGUAA   1
  *|*||||||||||||||||||||*
targets:2060   CCCUUCCAUCCCUCCUUGUACAUC   2083

1.0 PREDICTED: Zea mays proline--tRNA ligase, cytoplasmic-like (LOC103648437), transcript variant X4, mRNA NA coding protein psRNATarget