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BaseInfo

ncRNA ID novel_zma_miR14508
Species Zea mays
Class miRNA
Genome position Chr1:213001529-213001604 [+]
Reference genome RefGen_v4
Source SRR1583942
Length 22
Mature sequence(if miRNA) 55 - UGAUCCGGCGAACGUGGGAGGC - 76
Stem-loop(if miRNA) --    A  U   U UU     U   C    AA   UC
  UUCC AC UUC U  GAUCG GCG AUCC  UCG  G
  |||| || ||| |  ||||| ||| ||||  |||  G
  GAGG UG AAG G  CUAGU CGU UAGG  AGC  C
CG    G  C   C GC     U   -    GG   UA
Stem-loop sequence UUCCAACUUUCUUUUGAUCGUGCGCAUCCAAUCGUCGGCAUCGAGGGGAUUGCUUGAUCCGGCGAACGUGGGAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008651195.2
ncRNA:22   CGGAGGGUGCAAGCGGCCUAGU   1
  ||||||**|||||||||||||*
targets:3158   GCCUCCGCCGUUCGCCGGAUCC   3179

3.0 PREDICTED: Zea mays probable LRR receptor-like serine/threonine-protein kinase At4g26540 (LOC103630103), mRNA NA coding protein psRNATarget