ncRNA ID | novel_zma_miR14502 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:14854569-14854772 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089702 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUAGAAGAUGUUUGUAGUCCCUU - 24 |
Stem-loop(if miRNA) |
--AG     G                        C          C  A           C                                   U   UA     UAGAA AUGUUUGUAGUCCCUUUUUUGUGA GUAAAUCUUU GG UGACAAUAUUG GAAGCGCUAUGUUUAGAGUCCCAAAUAUACAAUUA CUU  U     ||||| |||||||||||||||||||||||| |||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| |||     AUCUU UAUAAACAUCAGGGAAAAAACGCU CAUUUAGAAA CC ACUGUUAUAAC CUUUGUGAUACAAAUCUCAGGGUUUAUAUGUUAAU GAG  C GUUA     G                        U          A  C           A                                   C   UC |
Stem-loop sequence | AGUAGAAGAUGUUUGUAGUCCCUUUUUUGUGACGUAAAUCUUUCGGAUGACAAUAUUGCGAAGCGCUAUGUUUAGAGUCCCAAAUAUACAAUUAUCUUUAUCCUGAGCUAAUUGUAUAUUUGGGACUCUAAACAUAGUGUUUCACAAUAUUGUCACCCAAAAGAUUUACUUCGCAAAAAAGGGACUACAAAUAUGUUCUAAUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008656417.2 |
|
2.5 | PREDICTED: Zea mays UDP-glycosyltransferase 74B1 (LOC100274322), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
EU941959.1 |
|
2.5 | Zea mays clone 1472937 mRNA sequence | NA | coding protein | psRNATarget |